DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Acam

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster


Alignment Length:136 Identity:48/136 - (35%)
Similarity:81/136 - (59%) Gaps:5/136 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPINFTMFLT 90
            :.||||||:||...|:...|.:...:|..::.:||:|||:..|..::.||.    |.:|||.|..
  Fly     6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGL 154
            :..::::.||.|:.::.||..||.:..|.:....||.::..:|::.|||::|||.|||... :|:
  Fly    71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGM 135

  Fly   155 FDYLEF 160
            .:|.||
  Fly   136 INYEEF 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 48/136 (35%)
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 48/136 (35%)

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