DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Mlc1

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_476639.1 Gene:Mlc1 / 43323 FlyBaseID:FBgn0002772 Length:155 Species:Drosophila melanogaster


Alignment Length:125 Identity:32/125 - (25%)
Similarity:55/125 - (44%) Gaps:12/125 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPT---DDYLDGMMNEAPGPINFTMFLTL 91
            :.:..||  .|.::....:| ::..||.|.|.:|..|||   .:.|.|........|....||.:
  Fly     8 EVENVEF--VFEVMGSPGEG-IDAVDLGDALRALNLNPTLALIEKLGGTKKRNEKKIKLDEFLPI 69

  Fly    92 FG----ERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYRE 147
            :.    |:.||. .||.|: ....:|:|..|.:....|:..|..:|:...||.|:.::.:
  Fly    70 YSQVKKEKEQGC-YEDFIE-CLKLYDKEENGTMLLAELQHALLALGESLDDEQVETLFAD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 32/125 (26%)
Mlc1NP_476639.1 PTZ00184 1..150 CDD:185504 32/125 (26%)

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