DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and CG17770

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster


Alignment Length:140 Identity:38/140 - (27%)
Similarity:70/140 - (50%) Gaps:5/140 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNE----APGPINFTMFLT 90
            :.|:.:.:.||::.|......:...:|..::.|:...|:|..|..:..|    ..|.:..:.||.
  Fly    22 EEQVKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDMELQEIQAEIDADGSGELYLSDFLH 86

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGL 154
            :..:|......||.|..||..||:|..|::.|...|.::..||::.||::|:|:.|:|... .|.
  Fly    87 IMSQRYANMSTEDEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDANSDLEGN 151

  Fly   155 FDYLEFTRIL 164
            .||:.|.|::
  Fly   152 IDYVRFVRMM 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 38/138 (28%)
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 38/138 (28%)

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