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Protein Alignment sqh and myl9b
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_998377.1 |
Gene: | myl9b / 406493 |
ZFINID: | ZDB-GENE-040426-2296 |
Length: | 173 |
Species: | Danio rerio |
Alignment Length: | 174 |
Identity: | 141/174 - (81%) |
Similarity: | 157/174 - (90%) |
Gaps: | 3/174 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK 65
|||::..|: |||||.|||||||||||||:||.||||||||||||||||::|||||||||||||
Zfish 1 MSSKRAKGK--TTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK 63
Fly 66 NPTDDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
||:||||:|||:|||||||||||||:|||||.||||||||:|||.|||||..|.:.||.||||||
Zfish 64 NPSDDYLEGMMSEAPGPINFTMFLTMFGERLNGTDPEDVIRNAFACFDEEGSGFIHEDHLRELLT 128
Fly 131 TMGDRFTDEDVDEMYREAPI-KNGLFDYLEFTRILKHGAKDKDE 173
|||||||||||||::||||| |.|.|:|.||||||||||||||:
Zfish 129 TMGDRFTDEDVDELFREAPIDKKGNFNYGEFTRILKHGAKDKDD 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
130/155 (84%) |
myl9b | NP_998377.1 |
FRQ1 |
19..169 |
CDD:227455 |
125/149 (84%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170592106 |
Domainoid |
1 |
1.000 |
63 |
1.000 |
Domainoid score |
I10226 |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
288 |
1.000 |
Inparanoid score |
I2809 |
OMA |
1 |
1.010 |
- |
- |
|
QHG51980 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000218 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm25265 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103056 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23049 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4770 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X162 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
15 | 14.800 |
|
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