DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and tnnc2

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_012827046.1 Gene:tnnc2 / 394554 XenbaseID:XB-GENE-480259 Length:163 Species:Xenopus tropicalis


Alignment Length:149 Identity:45/149 - (30%)
Similarity:79/149 - (53%) Gaps:10/149 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNE----APGPINFT 86
            :...:..|||||.||:|.|.:..|.:..::|..::..||:|||.:.||.::.|    ..|.|:|.
 Frog    13 SFLSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 77

  Fly    87 MFLTL----FGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYRE 147
            .||.:    ..|..||...|: :...|..||:...|.:..:.|.|:|.:.|:..|||:::|:.::
 Frog    78 EFLVMMVRQMKEDAQGKSEEE-LAECFRIFDKNADGYIDGEELAEILRSSGESITDEEIEELMKD 141

  Fly   148 APIKN-GLFDYLEFTRILK 165
            ....| |..|:.||.::::
 Frog   142 GDKNNDGKIDFDEFLKMME 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 45/145 (31%)
tnnc2XP_012827046.1 PTZ00184 15..159 CDD:185504 45/144 (31%)

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