DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and zgc:153867

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_017209013.2 Gene:zgc:153867 / 337226 ZFINID:ZDB-GENE-030131-9170 Length:209 Species:Danio rerio


Alignment Length:170 Identity:51/170 - (30%)
Similarity:83/170 - (48%) Gaps:18/170 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKRAQRATSNVF------AMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTD-DY 71
            |.|..|.:.:.|      :.|.:.||.||||||.:.|:..||.:......|::.:||:||.: :.
Zfish    42 KPRMLRPSDSPFDPSTLESDFSEDQILEFKEAFLLFDRTGDGKITYNQCGDVMRALGQNPVNAEV 106

  Fly    72 LDGMMNEAPGPIN-----FTMFLTLF----GERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRE 127
            |..:.|.....:|     |..||.:.    ..:.|||. ||.:: ....||:|..|.:....||.
Zfish   107 LKVLGNPKAEEMNHKLLDFEQFLPMLQAIAKNKDQGTF-EDFVE-GLRVFDKEGNGTVMGAELRH 169

  Fly   128 LLTTMGDRFTDEDVDEMYREAPIKNGLFDYLEFTRILKHG 167
            :|||:|::.|:|:|:.:.......||..:|.|..|::..|
Zfish   170 VLTTLGEKMTEEEVETLLAGHEDANGCINYEELVRMVMSG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 46/146 (32%)
zgc:153867XP_017209013.2 None

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