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Protein Alignment sqh and myl12.2
DIOPT Version :9
| Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001124061.1 |
Gene: | myl12.2 / 337084 |
ZFINID: | ZDB-GENE-030131-9028 |
Length: | 172 |
Species: | Danio rerio |
| Alignment Length: | 174 |
Identity: | 140/174 - (80%) |
| Similarity: | 157/174 - (90%) |
Gaps: | 3/174 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK 65
|||::..|: |||||.|||||||||||||:||.||||||||||||||||::|||||||||||||
Zfish 1 MSSKRAKGK--TTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK 63
Fly 66 NPTDDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
||||:||:.||||||||||||||||:|||:|.||||||||||||.|||||..|.:.||.||||||
Zfish 64 NPTDEYLEAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIKNAFACFDEEGTGFIQEDYLRELLT 128
Fly 131 TMGDRFTDEDVDEMYREAPI-KNGLFDYLEFTRILKHGAKDKDE 173
|||||||||:|||::||||| |.|.|:|:||||||||||||||:
Zfish 129 TMGDRFTDEEVDELFREAPIDKKGNFNYVEFTRILKHGAKDKDD 172
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
129/155 (83%) |
| myl12.2 | NP_001124061.1 |
FRQ1 |
19..169 |
CDD:227455 |
124/149 (83%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
63 |
1.000 |
Domainoid score |
I10226 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
1 |
1.000 |
- |
- |
|
H68515 |
| Inparanoid |
1 |
1.050 |
288 |
1.000 |
Inparanoid score |
I2809 |
| OMA |
1 |
1.010 |
- |
- |
|
QHG51980 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000218 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm25265 |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103056 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR23049 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4770 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X162 |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
15 | 14.910 |
|
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