DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and myl1

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_956294.1 Gene:myl1 / 336165 ZFINID:ZDB-GENE-030131-8109 Length:190 Species:Danio rerio


Alignment Length:202 Identity:48/202 - (23%)
Similarity:89/202 - (44%) Gaps:52/202 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRKTAGRRATTKKRAQRA----------------TSNVFAMFDQAQIAEFKEAFNMIDQNRDG 49
            |:.:|.| ::....|:|:.|                .|.|...|.|.|:.:::|||.:.|:..|.
Zfish     1 MAPKKDA-KKPEPPKKAEPAPAPAPAPEPPKADAVDLSGVKLDFTQDQMEDYREAFLLFDRVGDS 64

  Fly    50 FVEKEDLHDMLASLGKNPTDDYL---------DGMMNEAPGPINFTMFLTLFGERLQGTDPEDVI 105
            .|....:.|::.:||:|||:..:         |.|:|:.   ::|..||.:.         :.||
Zfish    65 KVAYNQIADIMRALGQNPTNKEVTKILGNPTADDMVNKR---VDFEGFLPML---------QVVI 117

  Fly   106 KN-----------AFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIKNGLFDYLE 159
            .|           ....||:|..|.:....||.:|:|:|::.::.::|.:.:....:||..:|..
Zfish   118 NNPNKATYDDYVEGLRVFDKEGNGTVMGAELRIVLSTLGEKMSEAEIDALMQGQEDENGCVNYEA 182

  Fly   160 FTRILKH 166
            |   :||
Zfish   183 F---VKH 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 38/156 (24%)
myl1NP_956294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 6/32 (19%)
PTZ00184 44..189 CDD:185504 39/158 (25%)

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