DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and CG31802

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_724103.1 Gene:CG31802 / 318949 FlyBaseID:FBgn0051802 Length:186 Species:Drosophila melanogaster


Alignment Length:172 Identity:47/172 - (27%)
Similarity:82/172 - (47%) Gaps:7/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRKTAGRRATTKKRAQRATSNVFAMFD--QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASL 63
            :||.......|:...||:::.......||  .:|..:.|:||::.|....||:|.::|...:.:|
  Fly    10 VSSASVMHSSASISSRAKKSKKPKLPTFDLSLSQKVDIKKAFDLFDTQCTGFIETKELRVAIRAL 74

  Fly    64 GKNPTDDYLDGMMNE----APGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDR 124
            |..|..:.:..||:|    ..|.|.|..||.|...::...|....:..||..||::..|.:....
  Fly    75 GFEPKKEDIKRMMDEIDKDKTGRIAFNDFLYLMRLKMAEKDSNQDMMKAFSFFDDDRTGGISFLN 139

  Fly   125 LRELLTTMGDRFTDEDVDEMYREAPIK-NGLFDYLEFTRILK 165
            |:.:...:|::.|||::.||..||.:. :|.....||..::|
  Fly   140 LKRVAKELGEQLTDEELQEMIDEANVSGDGEVSKEEFLNLIK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 41/143 (29%)
CG31802NP_724103.1 PTZ00183 38..185 CDD:185503 41/144 (28%)

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