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Protein Alignment sqh and Myl9
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001094355.2 |
Gene: | Myl9 / 296313 |
RGDID: | 1311235 |
Length: | 172 |
Species: | Rattus norvegicus |
Alignment Length: | 174 |
Identity: | 141/174 - (81%) |
Similarity: | 157/174 - (90%) |
Gaps: | 3/174 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK 65
|||::...: |||||.|||||||||||||:||.||||||||||||||||::|||||||||||||
Rat 1 MSSKRAKAK--TTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK 63
Fly 66 NPTDDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
||||:||:|||||||||||||||||:|||:|.||||||||:|||.|||||..|.:.||.||||||
Rat 64 NPTDEYLEGMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLT 128
Fly 131 TMGDRFTDEDVDEMYREAPI-KNGLFDYLEFTRILKHGAKDKDE 173
|||||||||:|||||||||| |.|.|:|:||||||||||||||:
Rat 129 TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
131/155 (85%) |
Myl9 | NP_001094355.2 |
FRQ1 |
19..169 |
CDD:227455 |
126/149 (85%) |
Information from Original Tools:
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