Protein Alignment sqh and Calm3

DIOPT Version :10

• Sequence 1: NP_511057.1
• Gene: sqh / 31554
• FlyBaseID: FBgn0003514
• Length: 174
• Species: Drosophila melanogaster
• Sequence 2: NP_036650.1
• Gene: Calm3 / 24244
• RGDID: 2259
• Length: 149
• Species: Rattus norvegicus
• Alignment Length: 146
• Identity: 60/146 - (41%)
• Similarity: 93/146 - (63%)
• Gaps: 8/146 - (5%)

  Fly    27 MFDQ---AQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPIN 84
            |.||   .|||||||||::.|::.||.:..::|..::.|||:|||:..|..|:||..    |.|:
  Rat     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65

  Fly    85 FTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAP 149
            |..|||:...:::.||.|:.|:.||..||::..|.:....||.::|.:|::.|||:||||.|||.
  Rat    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130

  Fly   150 IK-NGLFDYLEFTRIL 164
            |. :|..:|.||.:::
  Rat   131 IDGDGQVNYEEFVQMM 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqh	NP_511057.1	PTZ00184	27..164	CDD:185504	60/144 (42%)
Calm3	NP_036650.1	PTZ00184	1..149	CDD:185504	60/146 (41%)
		Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000250|UniProtKB:P0DP25	77..149		28/70 (40%)