DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and cal-8

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_495043.1 Gene:cal-8 / 184373 WormBaseID:WBGene00017394 Length:145 Species:Caenorhabditis elegans


Alignment Length:144 Identity:41/144 - (28%)
Similarity:76/144 - (52%) Gaps:9/144 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPINFTMFL 89
            |..:.||.:|.|...|:|.||.:.:::|...|..||:..::..::.|:.:|.    |.|:...||
 Worm     2 DSLKEAEIREVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFL 66

  Fly    90 TLFGERLQGTDP--EDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPI-K 151
            .:.  |.|..||  |..:::.|..||:...||:..|.|..::..:|::.|:.:..||.::..: .
 Worm    67 NVL--RRQICDPKEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDH 129

  Fly   152 NGLFDYLEFTRILK 165
            :|:.|:.||..|:|
 Worm   130 DGMIDFQEFVNIIK 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 39/141 (28%)
cal-8NP_495043.1 PTZ00184 7..142 CDD:185504 38/136 (28%)

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