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Protein Alignment sqh and mlc-2
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_510828.1 |
Gene: | mlc-2 / 181775 |
WormBaseID: | WBGene00003370 |
Length: | 170 |
Species: | Caenorhabditis elegans |
Alignment Length: | 164 |
Identity: | 74/164 - (45%) |
Similarity: | 108/164 - (65%) |
Gaps: | 2/164 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 RATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDG 74
:|..||.:::.:.:..|.|||..|.||||||.::|||:||.::|.||.|:.||:|:...|..:|.
Worm 3 KAAKKKSSKKRSGSEAAQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDA 67
Fly 75 MMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELL-TTMGDRFTD 138
|:.||.||||||:|||||||||.|||||..|..||..||:::.|.:.||.|.::| ...|:...:
Worm 68 MIKEASGPINFTVFLTLFGERLTGTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDE 132
Fly 139 EDVDEMYR-EAPIKNGLFDYLEFTRILKHGAKDK 171
::|..||: :.||:.|..||..|..::..||:|:
Worm 133 DEVKAMYKGKPPIEGGEVDYKAFAHLITTGAQDE 166
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
71/156 (46%) |
mlc-2 | NP_510828.1 |
FRQ1 |
13..159 |
CDD:227455 |
68/145 (47%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
93 |
1.000 |
Domainoid score |
I4764 |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000218 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23049 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.920 |
|
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