DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Mylpf

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_058034.1 Gene:Mylpf / 17907 MGIID:97273 Length:169 Species:Mus musculus


Alignment Length:171 Identity:87/171 - (50%)
Similarity:111/171 - (64%) Gaps:8/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPT 68
            |.|.|||     ....:||||:||||.||.||||||.:|||||||.::||||.|..|::|: |..
Mouse     4 KKAKRRA-----GAEGSSNVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63

  Fly    69 DDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMG 133
            ::.||.||.||.||||||:|||:|||:|:|.||||||..||...|.|..|.:.:..|.|||||..
Mouse    64 NEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKQFLEELLTTQC 128

  Fly   134 DRFTDEDVDEMYRE-APIKNGLFDYLEFTRILKHG-AKDKD 172
            |||:.|::..|:.. .|...|..||.....::.|| |||::
Mouse   129 DRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 73/138 (53%)
MylpfNP_058034.1 PTZ00184 21..157 CDD:185504 73/135 (54%)

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