DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Myl6

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001304146.1 Gene:Myl6 / 17904 MGIID:109318 Length:158 Species:Mus musculus


Alignment Length:140 Identity:44/140 - (31%)
Similarity:72/140 - (51%) Gaps:12/140 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTD-DYLDGMMNEAPGPIN-----FT 86
            |.:.|.|||||||.:.|:..||.:......|::.:||:|||: :.|..:.|.....:|     |.
Mouse     4 FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFE 68

  Fly    87 MFL----TLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYRE 147
            .||    |:...:.||| .||.:: ....||:|..|.:....:|.:|.|:|::.|:|:|:.:...
Mouse    69 HFLPMLQTVAKNKDQGT-YEDYVE-GLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAG 131

  Fly   148 APIKNGLFDY 157
            ....||..:|
Mouse   132 HEDSNGCINY 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 44/140 (31%)
Myl6NP_001304146.1 PTZ00184 5..142 CDD:185504 43/139 (31%)

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