DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Myl4

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_030101494.1 Gene:Myl4 / 17896 MGIID:97267 Length:205 Species:Mus musculus


Alignment Length:151 Identity:43/151 - (28%)
Similarity:78/151 - (51%) Gaps:16/151 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDG--FVEKEDLHDMLASLGKNPTDDYLDGMMNEAPGP-------INF 85
            :|..|||||||::.|:...|  .:......|:|.:||:|||:..:..::.: |.|       ::|
Mouse    58 EAVAAEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGK-PKPEEMSSKTLDF 121

  Fly    86 TMFLTLF----GERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYR 146
            .|||.:.    ..:.||| .||.:: ....||:|:.|.:....||.:|.|:|::.::.:|:::..
Mouse   122 EMFLPILQHISRNKEQGT-YEDFVE-GLRVFDKESNGTVMGAELRHVLATLGEKMSEAEVEQLLS 184

  Fly   147 EAPIKNGLFDYLEFTRILKHG 167
            .....||..:|..|.:.:..|
Mouse   185 GQEDANGCINYEAFVKHIMSG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 42/146 (29%)
Myl4XP_030101494.1 PTZ00184 62..204 CDD:185504 41/144 (28%)

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