DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Mlc2

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_321477.2 Gene:Mlc2 / 1281552 VectorBaseID:AGAMI1_014485 Length:212 Species:Anopheles gambiae


Alignment Length:169 Identity:67/169 - (39%)
Similarity:104/169 - (61%) Gaps:7/169 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDG 74
            |.::.::|::|.|:||.:|.|.|||||||||.::|.::||.:.|.||.....:|||..:|..||.
Mosquito    47 RGSSSRKAKKAPSSVFVLFSQKQIAEFKEAFALMDNDKDGVIGKNDLRSTFDALGKLVSDKELDE 111

  Fly    75 MMNEAPGPINFTMFLTLFGERLQ--GTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMG-DRF 136
            |:.||.||:|||..||||..|:.  |.|.:||:.|||..||..  |.:..::.|..||..| |:|
Mosquito   112 MLGEATGPLNFTQLLTLFANRMSGGGQDDDDVVINAFKAFDTN--GKIDGEKFRFALTHWGQDKF 174

  Fly   137 TDEDVDEMYREAPIKN-GLFDYLEFTRILKHGAKDKDEQ 174
            |:::||:.:.:..|.: |..|......:|. |:::.:|:
Mosquito   175 TEDEVDDAFDQMVIDDKGYIDTAALIGMLT-GSEEGEEE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 58/140 (41%)
Mlc2XP_321477.2 PTZ00184 66..204 CDD:185504 57/139 (41%)

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