DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqh and sqh

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_309109.2 Gene:sqh / 1270410 VectorBaseID:AGAMI1_002024 Length:183 Species:Anopheles gambiae


Alignment Length:174 Identity:161/174 - (92%)
Similarity:170/174 - (97%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK 65
            ||||||||||.|||||||||||||||||||||||||||||||||||||||:||:|||||||||||
Mosquito     1 MSSRKTAGRRGTTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFIEKDDLHDMLASLGK 65

  Fly    66 NPTDDYLDGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
            |||::||:|||||||||||||||||||||||||||||:|||||||||||||.||:.|||||||||
Mosquito    66 NPTEEYLEGMMNEAPGPINFTMFLTLFGERLQGTDPEEVIKNAFGCFDEENTGVINEDRLRELLT 130

  Fly   131 TMGDRFTDEDVDEMYREAPIKNGLFDYLEFTRILKHGAKDKDEQ 174
            ||||||||||||||:|||||||.||||:||||||||||||||||
Mosquito   131 TMGDRFTDEDVDEMFREAPIKNSLFDYIEFTRILKHGAKDKDEQ 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 124/136 (91%)
sqhXP_309109.2 PTZ00184 27..164 CDD:185504 124/136 (91%)

Return to query results.
Submit another query.