DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and Calm1

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001300863.1 Gene:Calm1 / 12313 MGIID:88251 Length:197 Species:Mus musculus


Alignment Length:140 Identity:57/140 - (40%)
Similarity:91/140 - (65%) Gaps:5/140 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAP----GPINFTMFLT 90
            :.|||||||||::.|::.||.:..::|..::.|||:|||:..|..|:||..    |.|:|..|||
Mouse    55 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 119

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGL 154
            :...:::.||.|:.|:.||..||::..|.:....||.::|.:|::.|||:||||.|||.|. :|.
Mouse   120 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 184

  Fly   155 FDYLEFTRIL 164
            .:|.||.:::
Mouse   185 VNYEEFVQMM 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 57/138 (41%)
Calm1NP_001300863.1 PTZ00184 50..197 CDD:185504 57/140 (41%)

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