powered by:
Protein Alignment sqh and myl2a
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001373733.1 |
Gene: | myl2a / 100537244 |
ZFINID: | ZDB-GENE-120917-2 |
Length: | 169 |
Species: | Danio rerio |
Alignment Length: | 163 |
Identity: | 82/163 - (50%) |
Similarity: | 116/163 - (71%) |
Gaps: | 3/163 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 KKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPTDDYLDGMMN 77
|:.|:.|.||||:||:||||.||||||.::|||||||::|.||.|..|:||: |...:.:|.|:.
Zfish 8 KRAAEGANSNVFSMFEQAQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRLNVKQEEIDEMLK 72
Fly 78 EAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVD 142
||.||||||:|||:|||:|:|.|||:.|.|||..||.|..|:|.::.:.|:|||..|||:.|:::
Zfish 73 EASGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGILKKEYVTEMLTTQADRFSPEEME 137
Fly 143 EMYRE-APIKNGLFDYLEFTRILKHGAKDKDEQ 174
:|:.. .|...|..||.....|:.|| ::||::
Zfish 138 QMFSAFPPDAAGNLDYKNLVHIITHG-EEKDQE 169
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
79/156 (51%) |
myl2a | NP_001373733.1 |
FRQ1 |
16..164 |
CDD:227455 |
77/148 (52%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
102 |
1.000 |
Domainoid score |
I6778 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000218 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23049 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X162 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.020 |
|
Return to query results.
Submit another query.