DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and myl2a

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001373733.1 Gene:myl2a / 100537244 ZFINID:ZDB-GENE-120917-2 Length:169 Species:Danio rerio


Alignment Length:163 Identity:82/163 - (50%)
Similarity:116/163 - (71%) Gaps:3/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPTDDYLDGMMN 77
            |:.|:.|.||||:||:||||.||||||.::|||||||::|.||.|..|:||: |...:.:|.|:.
Zfish     8 KRAAEGANSNVFSMFEQAQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRLNVKQEEIDEMLK 72

  Fly    78 EAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVD 142
            ||.||||||:|||:|||:|:|.|||:.|.|||..||.|..|:|.::.:.|:|||..|||:.|:::
Zfish    73 EASGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGILKKEYVTEMLTTQADRFSPEEME 137

  Fly   143 EMYRE-APIKNGLFDYLEFTRILKHGAKDKDEQ 174
            :|:.. .|...|..||.....|:.|| ::||::
Zfish   138 QMFSAFPPDAAGNLDYKNLVHIITHG-EEKDQE 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 70/138 (51%)
myl2aNP_001373733.1 PTZ00184 21..161 CDD:185504 71/139 (51%)

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