DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and efcab11

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001107284.1 Gene:efcab11 / 100135073 XenbaseID:XB-GENE-962640 Length:163 Species:Xenopus tropicalis


Alignment Length:172 Identity:39/172 - (22%)
Similarity:66/172 - (38%) Gaps:32/172 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ATSNVFAMFDQAQIAE-----FKEAFNMIDQNRDGFVEKEDLHDMLASL-GKNPT----DDYLDG 74
            |.||  ::..:.|:::     |...|.:.|:...|::.:|||...:..| |..|:    |..|..
 Frog     4 AASN--SLCSKPQVSDNDKKTFLRVFQLCDEGNKGYLSREDLKVAVVMLFGYKPSKLEVDSMLSS 66

  Fly    75 MMNEAPGPI--NFTMFLTL-------FGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
            .|....|..  ||...:.|       ||.:          :..|..||....|.|..:..:....
 Frog    67 FMINTTGVTSDNFLKMMALKKAAQLSFGNQ----------REIFSVFDVHCRGFLTLEDFKRAFR 121

  Fly   131 TMGDRFTDEDVDEMYREA-PIKNGLFDYLEFTRILKHGAKDK 171
            .:....::..|.|.:||. ...:||..|.:|..:|.:|..|:
 Frog   122 QVAPHLSERTVVEAFREVDQDSDGLVSYKDFEFVLNYGEDDQ 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 33/156 (21%)
efcab11NP_001107284.1 PTZ00184 14..152 CDD:185504 32/147 (22%)

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