DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and zgc:163073

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001082980.1 Gene:zgc:163073 / 100037358 ZFINID:ZDB-GENE-070410-135 Length:213 Species:Danio rerio


Alignment Length:149 Identity:42/149 - (28%)
Similarity:76/149 - (51%) Gaps:16/149 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEAPGP-------INF 85
            |:..|:.||||||.:..::..| :......|::.:||:|||:..:..::.: |.|       |:|
Zfish    67 FNAQQLEEFKEAFQLFARSPSG-ISLAQCGDVMRALGQNPTNAEVLNVLGK-PKPEEMESKLIDF 129

  Fly    86 TMFLTLFGERLQGTDP---EDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYRE 147
            ..||.:..:..:.|:.   ||.:: ....||:|..|.:....||.:|.|:|:|.::.:||::...
Zfish   130 ETFLPMLQQVSKSTESGSFEDFVE-GLRVFDKEGNGTVMGAELRHVLATLGERLSEGEVDQLLAG 193

  Fly   148 APIKNGLFDYLEFTRILKH 166
            ....||..:|..|   :||
Zfish   194 QEDTNGCINYEAF---IKH 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 40/145 (28%)
zgc:163073NP_001082980.1 PTZ00184 70..212 CDD:185504 41/146 (28%)

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