DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efr and UTR1

DIOPT Version :9

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_565290.1 Gene:UTR1 / 814811 AraportID:AT2G02810 Length:332 Species:Arabidopsis thaliana


Alignment Length:258 Identity:53/258 - (20%)
Similarity:96/258 - (37%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 IPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLV--SSGDVKDNTHHSL 154
            |..|..::.:|..::..|:||.::...||...:|....::..|:.:..|:  ||..:....|.:.
plant   106 ISYPAQVLAKSSKMIPVMLMGTLVYGIRYTFPEYMCTFLVAGGVSIFALLKTSSKTISKLAHPNA 170

  Fly   155 KVDTSYSDFFWWTVGIGLLTIALLVTAYMGIYQEVIYKKYGKHPSEALFFTHMLPLPGFLIMAG- 218
                        .:|..|.::.|....:....|:.|..:|.|  :||           :.||.| 
plant   171 ------------PLGYALCSLNLAFDGFTNATQDSIASRYPK--TEA-----------WDIMLGM 210

  Fly   219 -------NIVQHFGI------------------AWSSEPVAVPLLGAIGLEWKFPLMLFYLLCNV 258
                   |::..||:                  ||.                    :|.|.:|..
plant   211 NLWGTIYNMIYMFGLPQGIGFKAIQFCKLHPEAAWD--------------------ILKYCICGA 255

  Fly   259 VTQYVCISAVYVLTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTILF 321
            |.|    :.:::..:...||..|.:.|.|||||::.|.:...||.:|..| |.:.:.||.:.:
plant   256 VGQ----NFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQW-GCVSMVFGGLAY 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:285625 53/258 (21%)
EamA 91..321 CDD:304911 53/256 (21%)
UTR1NP_565290.1 UAA 14..318 CDD:312076 53/258 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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