DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efr and Slc35b4

DIOPT Version :10

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_067410.1 Gene:Slc35b4 / 58246 MGIID:1931249 Length:331 Species:Mus musculus


Alignment Length:317 Identity:173/317 - (54%)
Similarity:227/317 - (71%) Gaps:19/317 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VFIGCCSNVVFLELIIQIDPGAGNLITFAQFLFIALEGLVFTSKFFTVRPKIALKDYVILVALFF 78
            ||.||||||:||||:.:..||.||::|||||||||:||.:|.:......|.|.::.|.|:|.:||
Mouse    10 VFAGCCSNVIFLELLARTHPGCGNIVTFAQFLFIAVEGFLFEANLGRKPPAIPIRYYAIMVTMFF 74

  Fly    79 GANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLVSS 143
            ..:|.||||.|.||.||||||||||||:||||:||::|||||::.:|:|:|:::|||.:||.:|:
Mouse    75 TVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSMFKYTSIALVSAGIFICTFMSA 139

  Fly   144 GDVKDNTHHSLKVDTSYSD------FFWWTVGIGLLTIALLVTAYMGIYQEVIYKKYGKHPSEAL 202
            ..|        .|.|..||      |.||.:||..||.|||::|.|||:||.:|:::|||..|||
Mouse   140 KQV--------TVQTGLSDKDGFQAFAWWLLGIAALTFALLMSARMGIFQETLYRQFGKHSKEAL 196

  Fly   203 FFTHMLPLPGFLIMAGNIVQHFGIAWSSEPVAVPLLGAIGLEWKFPLMLFYLLCNVVTQYVCISA 267
            |:.|.||||||:.:|.:|..|..:...||...||::|.     ..|:|.||||.|||||||||..
Mouse   197 FYNHALPLPGFIFLASDIYDHVVLFNKSELYQVPVIGV-----TMPVMWFYLLMNVVTQYVCIRG 256

  Fly   268 VYVLTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTILFANV 324
            |::|||||.||||||||||||||||:|||:||:|.||:.||:||..||.||:::..|
Mouse   257 VFILTTECTSLTVTLVVTLRKFVSLIFSILYFQNQFTMWHWLGTSFVFIGTLMYTEV 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:462479 173/317 (55%)
Slc35b4NP_067410.1 UAA 2..314 CDD:462479 173/317 (55%)
Mediates endoplasmic reticulum retention. /evidence=ECO:0000250|UniProtKB:Q969S0 326..331
Blue background indicates that the domain is not in the aligned region.

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