DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efr and meigo

DIOPT Version :9

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001097853.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster


Alignment Length:315 Identity:75/315 - (23%)
Similarity:130/315 - (41%) Gaps:60/315 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IQIDPGAGNLITFAQFL--FIALEGLVFTSKFFTVRPKIALKD-------YVILVALFFGANVCN 84
            :|.|...|...|:|..|  ...|...||.....|:||:   |:       ||.....:..|.|..
  Fly    39 VQTDGSVGERFTYALALVWVQCLCNYVFAKVLLTIRPQ---KEDTTNAGSYVACSLTYLLAMVST 100

  Fly    85 NYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLVSSGDVKDN 149
            |.|..: :|.|..::.:|...:..||:|:::.:|.|:..:|:.|..|..|:|| .:...|.|.  
  Fly   101 NMAMRW-VPYPTAVVGKSAKPIPVMILGVLIGRKSYSWTRYACVLTIVLGVIL-FMYKEGKVS-- 161

  Fly   150 THHSLKVDTSYSDFFWWTVGIGLLTIALLVTAYMGIYQEVI---YKKYGKHPSEALFFTHMLPLP 211
               :|..:|:       .:|..||.::|.:....|..||.|   ....|:....|:.|...|.|.
  Fly   162 ---NLPAETT-------LLGEVLLFLSLSMDGLTGAVQERIRAASAPSGQQMMRAMNFWSTLMLG 216

  Fly   212 GFLIMAGNIVQ--HFGI----AWSSEPVAVPLLGAIGLEWKFPLMLFYLLCNVVTQYVCISAVYV 270
            ..::..|...:  :|.|    ||:.                   :....:|.|:.|:.    :::
  Fly   217 VAMVFTGEAKEFMYFTIRHPEAWTH-------------------LSLIAVCGVLGQFF----IFL 258

  Fly   271 LTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTILFANVI 325
            :......|..::|.|.|||.::|.|::.|.|......|:|.:|||  ..||.:::
  Fly   259 MVASFGPLACSVVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVF--AALFVDML 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:285625 75/313 (24%)
EamA 91..321 CDD:304911 54/238 (23%)
meigoNP_001097853.1 UAA 8..311 CDD:285625 75/313 (24%)
EamA 169..308 CDD:304911 37/163 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451128
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10778
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.