DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efr and hut1

DIOPT Version :9

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_595251.1 Gene:hut1 / 2541206 PomBaseID:SPBC839.11c Length:322 Species:Schizosaccharomyces pombe


Alignment Length:318 Identity:69/318 - (21%)
Similarity:126/318 - (39%) Gaps:58/318 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LITFAQFLFIALEGLVFT------------SKFFTVRPKIALKDYVILVALFFGANVCNNYAFNF 90
            |::.||.....|.||::.            .||......||:.   ..::.:||      ||..|
pombe    44 LLSLAQSFMTVLCGLLWNWFHGVSARGLLEPKFLGYFSSIAIS---ASLSSYFG------YASMF 99

  Fly    91 NIPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLV--SSGDVKDNTHHS 153
            ::..|..::.:|..|:..:.:.:.:.|:::...:|..|.|||||:.:.:..  :|...|...|.|
pombe   100 HLSYPTVILGKSCKLLPVIALHVFVYKRKFPPHKYLIVTMITAGVSIFSYFQNTSSKGKHAEHDS 164

  Fly   154 LKVDTSYSDFFWWTVGIGLLTIALLVTAYMGIYQEVIYKKYGKHPSEALFFTHMLPLPGFLIMAG 218
                         .:|:.||...||:.......|:.::.||              .|....:|  
pombe   165 -------------PIGLLLLFFNLLMDGITNTTQDKVFGKY--------------KLSSVTMM-- 200

  Fly   219 NIVQHFGIAWSSEPVAV-PLLGAIGLEW--KFPLMLFYLLCNVVTQYVCISAVYVLTTECASLTV 280
             |..:.|||..:....: |......|.:  :.|.:|..:|....|..|....::....:..|:|:
pombe   201 -IAVNLGIACLNGLYLISPFCNQQPLSFINRHPSILKDMLLFACTGSVGQLFIFFTLEKFGSITL 264

  Fly   281 TLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTILFA--NVINQVRDAYRARS 336
            ..:...||..::|.|:.:|.:..:...|:|.:|||.|..|.|  .::|....|.:..|
pombe   265 VTITLTRKIFTMLLSVFHFHHTVSSIQWLGILLVFLGISLEAGLKILNNNSTAKKKAS 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:285625 66/305 (22%)
EamA 91..321 CDD:304911 49/234 (21%)
hut1NP_595251.1 UAA 7..304 CDD:285625 64/298 (21%)
EamA 188..304 CDD:304911 28/132 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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