DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efr and pst-1

DIOPT Version :9

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_741546.3 Gene:pst-1 / 178980 WormBaseID:WBGene00004206 Length:440 Species:Caenorhabditis elegans


Alignment Length:362 Identity:67/362 - (18%)
Similarity:139/362 - (38%) Gaps:75/362 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LKALLGMLFVFIGCCSNVVFL----------------ELIIQIDPGAGNLITFAQFLFIALEGLV 53
            :..::.:||.|.|....:|.:                :|.::...|....:.|...:...:..|:
 Worm   115 INVIILLLFFFSGIQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRIVALVLSLM 179

  Fly    54 FTSKFFTVRPKIALKDYVILVALFFG--ANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLL 116
            ..:|.:|.:|......||.....|..  ::.|...|..: :..|...|.::..::..|:||.::.
 Worm   180 ILAKDWTKQPPHVPPLYVHSYTSFSNTISSWCQYEALKY-VSFPTQTICKASKVVVTMLMGRLVR 243

  Fly   117 KKRYNLRQYSSVAMITAGIILCTLVSSGDVKDNTHHSLKVDTSYSDFFWWTVGIGLLTIALLVTA 181
            .:||:..:|.....|..|..|..|.||.....:|       .:|:.|    .|:.|:...||..|
 Worm   244 GQRYSWFEYGCGCTIAFGASLFLLSSSSKGAGST-------ITYTSF----SGMILMAGYLLFDA 297

  Fly   182 YMGIYQEVIY---KKYGKHPSEALFFTHMLPLPGFLIMAGNIVQHFGIAWSS------------E 231
            :...:|:.::   .|..|:  :.:|..:..   ..::.|.::::. |..|||            :
 Worm   298 FTLNWQKALFDTKPKVSKY--QMMFGVNFF---SAILCAVSLIEQ-GTLWSSIKFGAEHVDFSRD 356

  Fly   232 PVAVPLLGAIGLEWKFPLMLFYLLCNVVTQYVCISAVYVLTTECASLTVTLVVTLRKFVSLLFSI 296
            ...:.|.||||       .:|               :|........:...:::|:|:.:|::.|.
 Worm   357 VFLLSLSGAIG-------QIF---------------IYSTIERFGPIVFAVIMTIRQMLSIVLST 399

  Fly   297 IYFRNPFTLNHWVGTILVFFGTILFANVINQVRDAYR 333
            |.:.:..|....:|.::||  ..:|.::..:..|..|
 Worm   400 IMYGHELTFLAAIGFMIVF--AAIFVDIHKKYSDKSR 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:285625 65/351 (19%)
EamA 91..321 CDD:304911 47/244 (19%)
pst-1NP_741546.3 UAA 121..423 CDD:285625 64/343 (19%)
EamA 312..423 CDD:304911 24/140 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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