DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efr and pst-2

DIOPT Version :9

Sequence 1:NP_572299.1 Gene:Efr / 31553 FlyBaseID:FBgn0029849 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001040855.1 Gene:pst-2 / 175787 WormBaseID:WBGene00018827 Length:364 Species:Caenorhabditis elegans


Alignment Length:354 Identity:87/354 - (24%)
Similarity:153/354 - (43%) Gaps:70/354 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LKALLGMLFVFIGCCSNVVFLELIIQIDPGA---GNLITFAQFLFIALEGLVFTSKFFTVRPKIA 66
            |:.:|..|.:||.........|||.:: ||.   |..:|..|||..:..|......:...:..|.
 Worm    40 LQFVLLSLAIFILYIGYGYMQELIFKL-PGMKPFGWTLTLIQFLIYSGCGYTECIIWHNTKRMIP 103

  Fly    67 LKDYVILVALFFGANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMI 131
            .:.|.: :|.|..|.:..:.|....:..|..:||:...|:..:|.||::..|||......:..::
 Worm   104 WRIYGV-IAFFTVATMGLSNASVGYLNYPTQVIFKCCKLIPVLIGGILIQGKRYGWIDIGAAMLM 167

  Fly   132 TAGIILCTLVSSGDVKDNTHHSLKVDTSYSDFFWWTVGIGLLTIALLVTAYMGIYQEVIYKKYGK 196
            :.|||:.||.      ||     ||..::.     :.|..::..|||..|.:|..||...||||.
 Worm   168 SLGIIMFTLA------DN-----KVSPNFD-----SRGYIMICGALLADAVIGNIQEKNMKKYGG 216

  Fly   197 HPSEALFFTHMLP---LPGFLIMAGNIVQHFGIAWSSEPVAVPLLGAIGLE--WK---FPLMLF- 252
            ..:|.:.:::.:.   :..|::::|.:..           |:|..    ||  ||   :.|:|. 
 Worm   217 SSNEMVLYSYGIGSVFIFAFVVLSGEVFS-----------AIPFF----LENSWKTFGYALILSC 266

  Fly   253 --YLLCNVVTQYVCISAVYVLTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNH-WVGTILV 314
              ||..|||..::.:....|..|         |.||||.::::.|.:.|..|||:.: :.|::::
 Worm   267 LGYLGVNVVLTHIKVFGALVAVT---------VTTLRKALTIILSFMLFSKPFTIEYVYAGSVVM 322

  Fly   315 FFGTILFANVINQVRDAYRARSSRKTHFD 343
            .   .::.|:.          |..||.:|
 Worm   323 L---AIYLNLY----------SKNKTSWD 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EfrNP_572299.1 UAA 6..325 CDD:285625 82/333 (25%)
EamA 91..321 CDD:304911 60/241 (25%)
pst-2NP_001040855.1 UAA 41..332 CDD:285625 82/345 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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