DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Btnd and Upb1

DIOPT Version :9

Sequence 1:NP_572298.1 Gene:Btnd / 31552 FlyBaseID:FBgn0029848 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_598756.1 Gene:Upb1 / 103149 MGIID:2143535 Length:393 Species:Mus musculus


Alignment Length:522 Identity:89/522 - (17%)
Similarity:143/522 - (27%) Gaps:259/522 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VVEHSQPVGDS-PRARTTSASESFQKIIREVGD------VDIIVFPEHILNSQATATFVPHESQN 90
            :|::..|:..| |.|...||   ..|.|.|:.:      |:||.|               .|:.|
Mouse    76 LVQNRIPLPTSAPVAEQVSA---LHKSIEEIAEVAAMCGVNIICF---------------QEAWN 122

  Fly    91 ITPCYQTDYELFLIELSCS-------------ARANHLYVVINVVEKELCAHGAGSDTYNPCPSS 142
            :...:.|..:|...|.:.|             |:.:::.||..::|::. .||            
Mouse   123 MPFAFCTREKLPWTEFAESAEDGLTTRFCQKLAKKHNMVVVSPILERDR-EHG------------ 174

  Fly   143 GVRYFNTNVVFDRRGRIVSRYRKTHLWR------HEYVSTSVLRSPDISIFRTDFGVTFGHFICF 201
            || .:||.||....|.::.:.||.|:.|      ..|.....|..|   :|:|.|| .....||:
Mouse   175 GV-LWNTAVVISNSGLVMGKTRKNHIPRVGDFNESTYYMEGNLGHP---VFQTQFG-RIAVNICY 234

  Fly   202 DMLFYDPAMKLVKEHKITDIVYPTYWFSELPFLGAVQLQEGWAFGNDVNVLAADASNPDGRTSGS 266
            .            .|      :|..|.                                      
Mouse   235 G------------RH------HPLNWL-------------------------------------- 243

  Fly   267 GIYAGRGGRLVAEIFEQPTTKLLIAEVPKREHGQLAPTFTPIFEPQRKTQRLTGLATYRDNNVDI 331
             :|:..|    |||...|:..:          |:|:.:..||      ..|...:|.:       
Mouse   244 -MYSING----AEIIFNPSATI----------GELSESLWPI------EARNAAIANH------- 280

  Fly   332 FESELLDDDFLSFERQLCHGSFCCTFSIERKVTSAAENELPSSGAKSYRYRIGVYWGNETTVIGV 396
                                  |.|.::.|.......||..|...|...:.:|.::|:       
Mouse   281 ----------------------CFTCALNRVGQEHFPNEFTSGDGKKAHHDLGYFYGS------- 316

  Fly   397 DRTEQATCALFACTDVRLASCGYIYPENEEVINTHHFTKLSISGNFPAAPRGRRLIMPSSLNALF 461
                                                        ::.|||.|.|           
Mouse   317 --------------------------------------------SYVAAPDGSR----------- 326

  Fly   462 LPVSVSDYEWIESPEAANNLDKTILVDLKLAKAQ--NDLLTF---------------AIWANYYT 509
                        :|..:.|.|..::.:|.|...|  ||..||               |:..||..
Mouse   327 ------------TPGLSRNQDGLLVTELNLNLCQQINDFWTFKMTGRLEMYARELAEAVKPNYSP 379

  Fly   510 DI 511
            :|
Mouse   380 NI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BtndNP_572298.1 biotinidase_like 29..308 CDD:143591 57/300 (19%)
Upb1NP_598756.1 PLN00202 6..392 CDD:177792 89/522 (17%)
ML_beta-AS 9..371 CDD:143611 85/510 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.