DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vanin-like and nft-1

DIOPT Version :9

Sequence 1:NP_572297.1 Gene:vanin-like / 31551 FlyBaseID:FBgn0040069 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_499556.1 Gene:nft-1 / 176628 WormBaseID:WBGene00003594 Length:440 Species:Caenorhabditis elegans


Alignment Length:73 Identity:21/73 - (28%)
Similarity:36/73 - (49%) Gaps:12/73 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 SNGLNVFNTNVVFDRQGVVVSRYRKVHLYG----------EAKNSTFLPELI-TFETDFGVTFGH 200
            |:..:.:||:::.|..||..:.|.|:||:.          |::.|....|:| ..:|..| ..|.
 Worm   103 SDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIG-RLGL 166

  Fly   201 FICFDILF 208
            .||:|:.|
 Worm   167 SICYDVRF 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vanin-likeNP_572297.1 biotinidase_like 33..304 CDD:143591 21/73 (29%)
nft-1NP_499556.1 nit 17..281 CDD:143596 21/73 (29%)
FHIT 300..418 CDD:238606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.