Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009297176.1 | Gene: | scn12aa / 795688 | ZFINID: | ZDB-GENE-060908-2 | Length: | 1940 | Species: | Danio rerio |
Alignment Length: | 2669 | Identity: | 545/2669 - (20%) |
---|---|---|---|
Similarity: | 902/2669 - (33%) | Gaps: | 1076/2669 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 272 PYPGFPEISIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKI 336
Fly 337 LQIFDDIIFAFFALEMTIKMVAMGICGK-NTYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAI 399
Fly 400 RTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC--S 462
Fly 463 LMRTEGMVYP------------LTVPEVYRVRVRVNSLSQYYEFSKDQD-YICSTPNDSGMHLCG 514
Fly 515 NFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFL 579
Fly 580 VISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERA 644
Fly 645 RYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQR----QQRKEGLLPNA 705
Fly 706 DNLTFSP-SR---IKCHHPKCPKYSNRKPS-SIQDQMITVMVPLNSASNNINNNNNNNSNSSNHN 765
Fly 766 GSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQ 830
Fly 831 QQ---QQQQQHSSSD--NTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMID 890
Fly 891 SEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEY----VLLHTPPALNADPATAGTTTTV 951
Fly 952 APTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQ 1016
Fly 1017 VNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAE 1081
Fly 1082 ALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEH 1146
Fly 1147 HQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQ 1211
Fly 1212 RSPTTRCLIS------VYRCMSRVCSWIR--RYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQ 1268
Fly 1269 PPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTG 1333
Fly 1334 GGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGG 1398
Fly 1399 KFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTS 1463
Fly 1464 H-WAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYD 1527
Fly 1528 ESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPAS 1592
Fly 1593 SAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYS 1657
Fly 1658 IKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPN 1722
Fly 1723 IFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDIS 1787
Fly 1788 KSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSE 1852
Fly 1853 RLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGD 1917
Fly 1918 NSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQ 1982
Fly 1983 PPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQ 2047
Fly 2048 QYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKD 2112
Fly 2113 QQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWF 2177
Fly 2178 DNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFT 2242
Fly 2243 SGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSS 2307
Fly 2308 LRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEG-----ENIKGVRNADECRRIPGN--VWTNR 2365
Fly 2366 KYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLN 2430
Fly 2431 MFVGVVVENFHRCR-----------EEQEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRM 2484
Fly 2485 FVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGW 2549
Fly 2550 KLYLKDRWNQLDVGIVLLSIV--------GIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKL 2606
Fly 2607 LKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFAN 2671
Fly 2672 FGMAFLTLFRVATGDNWNGIMKDTLRDNCDDAADCVRNC-------CVSSVIAPIFFVIFVLMAQ 2729
Fly 2730 FVLVNVVVAVLMKHL----EESHKQM-EDELDMEVEL-ERELVREQEFAQEQKLCQQLAEAQSKA 2788
Fly 2789 AAPPRPLAKVK----SLP-----------------KNFIYSTPSLD-------KKFPAVSGVNNP 2825
Fly 2826 SLTS 2829 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 89/320 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 76/234 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 98/273 (36%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 68/232 (29%) | ||
scn12aa | XP_009297176.1 | Ion_trans | 146..425 | CDD:278921 | 91/361 (25%) |
Na_trans_cytopl | <520..579 | CDD:288761 | 14/92 (15%) | ||
Ion_trans | 722..917 | CDD:278921 | 68/217 (31%) | ||
Na_trans_assoc | 943..1123 | CDD:284034 | 55/586 (9%) | ||
Ion_trans | 1145..1398 | CDD:278921 | 96/259 (37%) | ||
Na_channel_gate | 1391..1443 | CDD:240441 | 11/60 (18%) | ||
Ion_trans | 1465..1711 | CDD:278921 | 72/255 (28%) | ||
GPHH | 1723..1775 | CDD:293510 | 13/53 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |