Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579823.1 | Gene: | Scn9a / 78956 | RGDID: | 69368 | Length: | 1984 | Species: | Rattus norvegicus |
Alignment Length: | 2768 | Identity: | 566/2768 - (20%) |
---|---|---|---|
Similarity: | 990/2768 - (35%) | Gaps: | 1015/2768 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAF- 347
Fly 348 --FALEMTIKMVAMGIC-GKNTYLADSWNRLDF-FIVLAGLLEYVMHVENL-NLTAIRTIRVLRP 407
Fly 408 LRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC---SLMRTEGM 469
Fly 470 VYPLTVPEVYRVRVRVNSLSQYY---EFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAK 531
Fly 532 LFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDA 596
Fly 597 HSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEP 661
Fly 662 ATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYS 726
Fly 727 NRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCT 791
Fly 792 TVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSD-NTEQSLAPDGLPR 855
Fly 856 SSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASR 920
Fly 921 RPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGA 985
Fly 986 SGGAGTGGTTEKSNIFSTEKMTQAGD-----GSIWQVNLPQTIGTIANPYADCSELG-------- 1037
Fly 1038 ---IHDAMTCQELLAFSVAFSA-ALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQ 1098
Fly 1099 TTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHS 1163
Fly 1164 RNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSR 1228
Fly 1229 V----CS--WI--RRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSG 1285
Fly 1286 IFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRI 1350
Fly 1351 LKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTC 1415
Fly 1416 PEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAAL-YFVALMTFGNY 1479
Fly 1480 VLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYE 1544
Fly 1545 VRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSAS-GTSGASAPG 1608
Fly 1609 DRERDRDRDR---DRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSK 1670
Fly 1671 IRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGI 1735
Fly 1736 PSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIY 1800
Fly 1801 VPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSF 1865
Fly 1866 KQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVS 1930
Fly 1931 GSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRM 1995
Fly 1996 SSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSI 2060
Fly 2061 SHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVP 2125
Fly 2126 GGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCI 2190
Fly 2191 TLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTI 2255
Fly 2256 SIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCT 2320
Fly 2321 FFIIFGILGVQLFKGTFYYC----EGENI--KGVRNADEC---RRIPGNV-WTNRKYNFDDLGKA 2375
Fly 2376 LMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENF 2440
Fly 2441 HRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDL 2497
Fly 2498 AIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDV 2562
Fly 2563 GIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQV 2627
Fly 2628 GNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIM 2692
Fly 2693 KDTLRD---NCD----DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EE 2746
Fly 2747 SHKQM-EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTP 2810
Fly 2811 SLDKKFPAVSGVNNPSLTSSAATNLNQVATAGSGGAAPGAVPAGSGAGPRRQTVQYFQQPPQSML 2875
Fly 2876 GGLSLAEMGGTLTPQALGARLGEPFGGGGGNKSGPRRQSYWQINPIRKRGVLSKERSLDEQAIRR 2940
Fly 2941 RNL--EAKRTSCDSLPWG--GDALDCRRGTIFESLESD 2974 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 93/315 (30%) |
Ion_trans | 1261..1495 | CDD:278921 | 76/234 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 97/273 (36%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 70/224 (31%) | ||
Scn9a | NP_579823.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 26..55 | ||
I. /evidence=ECO:0000305 | 112..410 | 101/357 (28%) | |||
Ion_trans | 147..410 | CDD:278921 | 94/322 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 461..542 | 16/151 (11%) | |||
Na_trans_cytopl | 487..606 | CDD:288761 | 27/206 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 576..609 | 6/37 (16%) | |||
II. /evidence=ECO:0000305 | 725..988 | 92/333 (28%) | |||
Ion_trans | 760..955 | CDD:278921 | 68/217 (31%) | ||
Na_trans_assoc | 981..1185 | CDD:284034 | 61/658 (9%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1015..1040 | 4/24 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1103..1145 | 17/204 (8%) | |||
III. /evidence=ECO:0000305 | 1178..1486 | 110/455 (24%) | |||
Ion_trans | 1224..1464 | CDD:278921 | 92/246 (37%) | ||
Na_channel_gate | 1456..1508 | CDD:240441 | 9/57 (16%) | ||
IV. /evidence=ECO:0000305 | 1495..1793 | 93/314 (30%) | |||
Ion_trans | 1530..1768 | CDD:278921 | 76/247 (31%) | ||
GPHH | 1780..1835 | CDD:293510 | 15/103 (15%) | ||
IQ | 1886..1908 | CDD:197470 | 4/21 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1916..1984 | 5/23 (22%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |