Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005265428.1 | Gene: | SCN10A / 6336 | HGNCID: | 10582 | Length: | 1959 | Species: | Homo sapiens |
Alignment Length: | 2510 | Identity: | 512/2510 - (20%) |
---|---|---|---|
Similarity: | 861/2510 - (34%) | Gaps: | 945/2510 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 302 WFERVSILVILLNCITLGMYQPCVDDACVTNRC---KILQIFDDIIFAFFALEMTIKMVAMGIC- 362
Fly 363 GKNTYLADSWNRLDFFIVLAGLLEYV-MHVENLNLTAIRTIRVLRPLRAINRIPSMRILVMLLLD 426
Fly 427 TLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVYRVRVRVNSLSQY 491
Fly 492 YEFSKDQDYICSTPNDSGMH---LCGNFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNWNQYYTTC 553
Fly 554 KQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMIN 618
Fly 619 LCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRM 683
Fly 684 LKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSAS 748
Fly 749 NNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHH 813
Fly 814 QQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQK 878
Fly 879 TILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPA 943
Fly 944 TAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGG--ASGGAGTGGTTEKSNIFSTEKM 1006
Fly 1007 TQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTS 1071
Fly 1072 LARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDS 1136
Fly 1137 HAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNA 1201
Fly 1202 LSPLDERPRQRSPTTRCLISVYRCMSRVCSWI--RRYIRRLVEHKYFQQGILLAILINTLSMGIE 1264
Fly 1265 YHNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMG 1329
Fly 1330 NGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMY 1394
Fly 1395 LFGGKFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGM 1459
Fly 1460 EKTSHWAAL-YFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSD 1523
Fly 1524 GMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINE 1588
Fly 1589 LPASSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLK 1653
Fly 1654 KTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLL 1718
Fly 1719 RPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVII 1783
Fly 1784 DDISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGS 1848
Fly 1849 SSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLN 1913
Fly 1914 NGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQ 1978
Fly 1979 NLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPD 2043
Fly 2044 NMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHR 2108
Fly 2109 LSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDN--RFRQICTWF 2171
Fly 2172 VNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYG 2236
Fly 2237 HDAYFTSGWNIMDGSLVTISIIDLLMSLI--SESSPRIFGILRVFRLLRSLRPLRVINRAPGLKL 2299
Fly 2300 VVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYC----EGE----NIKGVRNADECR- 2355
Fly 2356 -RIPGN-VWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFI 2418
Fly 2419 AFILLVGFFVLNMFVGVVVENFHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPY 2475
Fly 2476 YTNYSPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEA 2540
Fly 2541 NMKLVALGWKLYLKDRWNQLDVGIVLLSIVGI----VLEELETNTHQIIPINPTIIRVMRVLRIA 2601
Fly 2602 RVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEH 2666
Fly 2667 AHFANFGMAFLTLFRVATGDNWNGIMKDTLRDN---CD---DAADCVRNCCVSSVIAPIFFVIFV 2725
Fly 2726 LMAQFVLVNVVVAVLMKHL----EESHKQM-EDELDMEVE 2760 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 83/311 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 69/234 (29%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 96/276 (35%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 71/227 (31%) | ||
SCN10A | XP_005265428.1 | Ion_trans | 150..410 | CDD:278921 | 84/312 (27%) |
Na_trans_cytopl | 466..>537 | CDD:288761 | 20/145 (14%) | ||
Ion_trans | 685..897 | CDD:278921 | 68/233 (29%) | ||
Na_trans_assoc | 907..1150 | CDD:284034 | 73/588 (12%) | ||
Ion_trans | 1172..1430 | CDD:278921 | 96/266 (36%) | ||
Na_channel_gate | 1422..1474 | CDD:240441 | 11/57 (19%) | ||
Ion_trans | 1496..1735 | CDD:278921 | 76/250 (30%) | ||
GPHH | 1745..1802 | CDD:293510 | 3/5 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |