Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_008853.3 | Gene: | SCN3A / 6328 | HGNCID: | 10590 | Length: | 2000 | Species: | Homo sapiens |
Alignment Length: | 2676 | Identity: | 539/2676 - (20%) |
---|---|---|---|
Similarity: | 935/2676 - (34%) | Gaps: | 978/2676 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 251 DGDSSHTSSSSSSSSSGEPNLPY-----PGFPEI------------------------------- 279
Fly 280 ---SIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFD 341
Fly 342 DIIFAFFALEMTIKMVAMGICGKN-TYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRV 404
Fly 405 LRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC-------- 461
Fly 462 -----------SLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQD-YICSTPNDSGMHLCG 514
Fly 515 NFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFL 579
Fly 580 VISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERA 644
Fly 645 RYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLT 709
Fly 710 FSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAG 774
Fly 775 GGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHS 839
Fly 840 SSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKS 904
Fly 905 HPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAA 969
Fly 970 ATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCS 1034
Fly 1035 ELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVP----TG 1095
Fly 1096 QNQTTPGAEGATVMV---ASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNN 1157
Fly 1158 NTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRC---- 1218
Fly 1219 --LISVYRCMSRVCSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETS 1279
Fly 1280 NVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRT 1344
Fly 1345 FRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGL 1409
Fly 1410 ERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAAL-YFVAL 1473
Fly 1474 MTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTT 1538
Fly 1539 NDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSG 1603
Fly 1604 ASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRL 1668
Fly 1669 SKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDE 1733
Fly 1734 GIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATP 1798
Fly 1799 IYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQG 1863
Fly 1864 SFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAV 1928
Fly 1929 VSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQR 1993
Fly 1994 RMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKN 2058
Fly 2059 SISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSM 2123
Fly 2124 VPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALN 2188
Fly 2189 CITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLV 2253
Fly 2254 TISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLIC 2318
Fly 2319 CTFFIIFGILGVQLFKGTFYYCEGE------NIKGVRNADECRRIPGNV-WTNRKYNFDDLGKAL 2376
Fly 2377 MSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFH 2441
Fly 2442 RCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLA 2498
Fly 2499 IAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVG 2563
Fly 2564 IVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVG 2628
Fly 2629 NLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMK 2693
Fly 2694 DTLRD---NCD----DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EES 2747
Fly 2748 HKQM-EDELDMEVEL-ERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTP 2810
Fly 2811 SLDKKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 85/325 (26%) |
Ion_trans | 1261..1495 | CDD:278921 | 75/234 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 93/270 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 71/224 (32%) | ||
SCN3A | NP_008853.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 28..60 | 4/18 (22%) | |
I. /evidence=ECO:0000305 | 110..455 | 100/431 (23%) | |||
Ion_trans | 149..434 | CDD:278921 | 86/334 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 493..528 | 7/37 (19%) | |||
Na_trans_cytopl | 510..629 | CDD:288761 | 28/248 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 587..631 | 8/64 (13%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 662..681 | 7/26 (27%) | |||
II. /evidence=ECO:0000305 | 742..1014 | 91/419 (22%) | |||
Ion_trans | 777..972 | CDD:278921 | 67/217 (31%) | ||
Na_trans_assoc | 998..1200 | CDD:284034 | 58/585 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1118..1162 | 10/66 (15%) | |||
III. /evidence=ECO:0000305 | 1188..1499 | 107/516 (21%) | |||
Ion_trans | 1223..1477 | CDD:278921 | 93/260 (36%) | ||
Na_channel_gate | 1469..1521 | CDD:240441 | 10/57 (18%) | ||
IV. /evidence=ECO:0000305 | 1508..1806 | 96/312 (31%) | |||
Ion_trans | 1543..1781 | CDD:278921 | 77/247 (31%) | ||
ChtBD1 | 1708..>1743 | CDD:302575 | 7/34 (21%) | ||
GPHH | 1793..1848 | CDD:293510 | 16/65 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1949..2000 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |