Protein Alignment Ca-alpha1T and SCN1A

DIOPT Version :9

• Sequence 1: NP_001259267.1
• Gene: Ca-alpha1T / 31550
• FlyBaseID: FBgn0264386
• Length: 3218
• Species: Drosophila melanogaster
• Sequence 2: NP_001159435.1
• Gene: SCN1A / 6323
• HGNCID: 10585
• Length: 2009
• Species: Homo sapiens
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ca-alpha1T	NP_001259267.1	Ion_trans	332..636	CDD:278921
		Ion_trans	1261..1495	CDD:278921
		Ion_trans	2192..2448	CDD:278921
		Ion_trans	2510..2728	CDD:278921
SCN1A	NP_001159435.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	28..60
		I. /evidence=ECO:0000305	110..454
		Ion_trans	127..433	CDD:306908
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	455..529
		Na_trans_cytopl	510..705	CDD:314757
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	584..627
		II. /evidence=ECO:0000305	750..1022
		Ion_trans	767..980	CDD:306908
		Na_trans_assoc	1006..1213	CDD:310839
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1129..1163
		III. /evidence=ECO:0000305	1200..1514
		Ion_trans	1217..1492	CDD:306908
		Na_channel_gate	1484..1536	CDD:240441
		IV. /evidence=ECO:0000305	1523..1821
		Ion_trans	1540..1796	CDD:306908
		S1-S2 loop of repeat IV. /evidence=ECO:0000250|UniProtKB:A2APX8	1561..1571
		S3b-S4 loop of repeat IV. /evidence=ECO:0000250|UniProtKB:A2APX8	1619..1636
		GPHH	1800..1863	CDD:318993
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1986..2009

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910