Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001038588.1 | Gene: | scn5lab / 566868 | ZFINID: | ZDB-GENE-060908-3 | Length: | 1954 | Species: | Danio rerio |
Alignment Length: | 2608 | Identity: | 527/2608 - (20%) |
---|---|---|---|
Similarity: | 895/2608 - (34%) | Gaps: | 1017/2608 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 291 RNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAFFALEMTIK 355
Fly 356 MVAMGIC-GKNTYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRVLRPLRAINRIPSMR 418
Fly 419 ILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVYRVRV 483
Fly 484 RVN--SLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNW 546
Fly 547 NQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDWIYFVLLIVI 611
Fly 612 GSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAHLW 676
Fly 677 RRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVM 741
Fly 742 VPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASV 806
Fly 807 TMSSAHHQQHQLLQHQQQQHQNQQQ-------------------QQQQQQHSSSDNTEQSLAPDG 852
Fly 853 LPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTS 917
Fly 918 ASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQN 982
Fly 983 GGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQEL 1047
Fly 1048 LAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVAS 1112
Fly 1113 TAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRM 1177
Fly 1178 REPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCSW--IRRYIRRL 1240
Fly 1241 VEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIA 1305
Fly 1306 NGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRT 1370
Fly 1371 MDNVAVFFSLLVLFIFIFSILGMYLFGGKF----CKFLDESGLERECTCPEIISRHPQCECDRKH 1431
Fly 1432 FNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMTFGNYVLFNLLVAILVEGFSS 1495
Fly 1496 ER----NERRE---------REQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRN 1547
Fly 1548 RWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRER 1612
Fly 1613 DRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDP 1677
Fly 1678 PIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIP 1742
Fly 1743 PSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISST 1807
Fly 1808 ADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRG 1872
Fly 1873 SSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTK 1937
Fly 1938 ETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAF 2002
Fly 2003 SKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKK 2067
Fly 2068 RLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYS 2132
Fly 2133 KLKMLIEQLTPKHF------TTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCIT 2191
Fly 2192 LAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTIS 2256
Fly 2257 IIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTF 2321
Fly 2322 FIIFGILGVQLFKGTFYYCEGE-----NIKGVRNADECRRIPGN--VWTNRKYNFDDLGKALMSL 2379
Fly 2380 FVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCR 2444
Fly 2445 EE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAA 2501
Fly 2502 VIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVL 2566
Fly 2567 LSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLG 2631
Fly 2632 LLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTL 2696
Fly 2697 R---DNCD----DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EESHKQ 2750
Fly 2751 M-EDELDMEVELERELVRE-QEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTPSLD 2813
Fly 2814 KKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 88/307 (29%) |
Ion_trans | 1261..1495 | CDD:278921 | 74/238 (31%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 89/270 (33%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 69/224 (31%) | ||
scn5lab | NP_001038588.1 | Ion_trans | 154..427 | CDD:278921 | 88/305 (29%) |
Na_trans_cytopl | 478..566 | CDD:288761 | 19/147 (13%) | ||
Ion_trans | 723..918 | CDD:278921 | 66/221 (30%) | ||
Na_trans_assoc | 944..1143 | CDD:284034 | 65/684 (10%) | ||
Ion_trans | 1165..1419 | CDD:278921 | 89/260 (34%) | ||
Na_channel_gate | 1411..1463 | CDD:240441 | 12/57 (21%) | ||
Ion_trans | 1485..1723 | CDD:278921 | 73/247 (30%) | ||
GPHH | 1735..1790 | CDD:293510 | 16/65 (25%) | ||
IQ | 1841..1863 | CDD:197470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |