DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-alpha1T and cacna1fb

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:XP_021333942.1 Gene:cacna1fb / 559964 ZFINID:ZDB-GENE-031104-1 Length:2068 Species:Danio rerio


Alignment Length:3245 Identity:596/3245 - (18%)
Similarity:924/3245 - (28%) Gaps:1627/3245 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 RRHSGASSLSDAAAATAAGRSRSRGGGRTGGAVSSSTGSSCNGSCSSDDGDS------------- 254
            |:.:|.|:..:.....|.......|.|..||                |:||.             
Zfish     6 RKRNGYSNEEEEGGGEAEEEEEEGGEGGGGG----------------DEGDKEEKDEWDEEDRPK 54

  Fly   255 -SHTSSSSSSSSSGEPNLPYPGFPEISIRALTQYTR-PRN-WCLMLITNP----------W--FE 304
             :.|.:..|::||...........:..::...|..| ||. :||.| .||          |  |:
Zfish    55 MNRTETLMSTTSSTATQKKKSQHVKKQVQGSNQVQRAPRALYCLKL-NNPIRRAALHLVEWKPFD 118

  Fly   305 RVSILVILLNCITLGMYQPC-VDDACVTNRCKILQIFDDIIFAFFALEMTIKMVAMG-ICGKNTY 367
            ...:|.|..||:.||:.:|. .||:..||.  .|:..:.:....|.:|..:|::|.| :...::|
Zfish   119 IFILLAIFANCVALGVSKPFPEDDSNATNH--DLEQVEYVFLIIFTIETFLKILAYGLVMHPSSY 181

  Fly   368 LADSWNRLDFFIVLAGL----LEYVMHVE------------NLNLTAIRTIRVLRPLRAINRIPS 416
            :.:.||.|||.||:.||    ||.|.|..            .|::.|:|..|||||||.::.:||
Zfish   182 IRNGWNLLDFVIVIVGLFSVVLETVTHKSGETTSHTPGKPGGLDVKALRAFRVLRPLRLVSGVPS 246

  Fly   417 MRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVYRV 481
            ::|::..::..:..|.::.||..||..|:.|||::|:.|.:.:.|..:.|:              
Zfish   247 LQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMHRTCFFIGTD-------------- 297

  Fly   482 RVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNEPTNTSC-VN 545
                       .::.|....|:        ..|:                        ...| ||
Zfish   298 -----------NYADDDPLPCA--------FAGH------------------------GRQCYVN 319

  Fly   546 WNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSF-WDWIYFVLLI 609
            .::    |:...|.|..|..:|||...|.:.:|..|::|||||::|::.||..| ..|:|||.|:
Zfish   320 GSE----CRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLV 380

  Fly   610 VIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAH 674
            :.||||::||.|.|::.:||  |:||..:.|.:                                
Zfish   381 IFGSFFVLNLVLGVLSGEFS--KEREKAKARGD-------------------------------- 411

  Fly   675 LWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMIT 739
                     .:|.|    ::||.:|.|....|.:|                              
Zfish   412 ---------FQKLR----EKQQMEEDLCGYMDWIT------------------------------ 433

  Fly   740 VMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAA 804
                   .:.:|:..:.:                  ||..                         
Zfish   434 -------QAEDIDEFDED------------------GNRR------------------------- 448

  Fly   805 SVTMSSAHHQQHQLLQHQQQ------QHQNQQQQQQQQQHSSSDNTEQSLAPDGLPRSSSLKKST 863
             ||:..        |..:::      .|.|:.........::|:|||.                 
Zfish   449 -VTLRD--------LADKKRGKFGWFSHSNETHASLPASETASENTEN----------------- 487

  Fly   864 AHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNE 928
                                     ||.|                                    
Zfish   488 -------------------------IDEE------------------------------------ 491

  Fly   929 YVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTGG 993
                ||                                                           
Zfish   492 ----HT----------------------------------------------------------- 493

  Fly   994 TTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAAL 1058
                                                  ||          |.             
Zfish   494 --------------------------------------DC----------CA------------- 497

  Fly  1059 PTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQP 1123
                                                                             
Zfish   498 ----------------------------------------------------------------- 497

  Fly  1124 STVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYM 1188
                                                                             
Zfish   498 ----------------------------------------------------------------- 497

  Fly  1189 EDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCSWIRRYIRRLVEHKYFQQGILLA 1253
               |||..:             .:.|..|.|....||       |||..|..|:...|...:|:.
Zfish   498 ---ACCARI-------------MKIPCCRALRRWNRC-------IRRNCRTAVKSVTFYWLVLIL 539

  Fly  1254 ILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIV-- 1316
            :.:||.....|::|||..||.:.:.:|.|...:|.||||||:.:.|...|....||.||..:|  
Zfish   540 VFLNTALSASEHYNQPEWLTDVQDIANKVLLSLFTVEMLLKMYSLGLQVYFVAFFNRFDCFVVCG 604

  Fly  1317 -----ILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAV 1376
                 :|..:||....          |:||||..|||||.|:.|....|...:..:|.:|.::|.
Zfish   605 GILETVLVEMEIMPPL----------GISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIAS 659

  Fly  1377 FFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVT 1441
            ...||.||:.||::|||.||||||  ..||:                  :..|..|::...|.:|
Zfish   660 LLLLLFLFLIIFALLGMQLFGGKF--NFDET------------------QTKRSTFDSFPQALLT 704

  Fly  1442 VFQILTQEDWNVVLFNGMEK------TSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNER 1500
            .|||||.||||||:::|:..      ......||||.|...|||:|.|:.:||.|:..:....:.
Zfish   705 CFQILTGEDWNVVMYDGIMAYGGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGGDGDN 769

  Fly  1501 REREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELI 1565
            ::.|:::                                                          
Zfish   770 KKNEEKK---------------------------------------------------------- 776

  Fly  1566 IEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRER 1630
                                                .|.:.|.:.|     :.:.:.|.|.:.|.
Zfish   777 ------------------------------------EGEAEPAEEE-----NGEVKVDMDEEYEE 800

  Fly  1631 DREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTL 1695
            :.|...|..|||                           ||:|                      
Zfish   801 EEEPEEGDDEEG---------------------------KIQL---------------------- 816

  Fly  1696 EPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQL 1760
                                      |:              .|..||...:             
Zfish   817 --------------------------NV--------------ADFAPPKEKI------------- 828

  Fly  1761 GVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSS 1825
                                                                             
Zfish   829 ----------------------------------------------------------------- 828

  Fly  1826 PGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNP 1890
                                        ||:                                  
Zfish   829 ----------------------------LPI---------------------------------- 831

  Fly  1891 ARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTL 1955
                                                                             
Zfish   832 ----------------------------------------------------------------- 831

  Fly  1956 SIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSL 2020
                 |.||  |..|:                               |||               
Zfish   832 -----PEGS--AFFCL-------------------------------SKT--------------- 843

  Fly  2021 SYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQL 2085
                                                                             
Zfish   844 ----------------------------------------------------------------- 843

  Fly  2086 LQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTER 2150
                                                                             
Zfish   844 ----------------------------------------------------------------- 843

  Fly  2151 EDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYV 2215
                       |..|..|...::...|.|::|:||.|:.|:||.|.| |...|.....|..|:|.
Zfish   844 -----------NPIRVGCHTLIHHHIFTNLILVFIILSSISLAAEDP-IRAHSFRNNVLGYADYA 896

  Fly  2216 FTVVFTVEMFIKVVATGMFYGHDAYFTSGW-NIMDGSLVTISIIDLLM--SLISESSPRIFGILR 2277
            ||.:||||:.:|:...|.|. |:..|...| |::|..:|::|::...:  |.||        :::
Zfish   897 FTSIFTVEILLKMTVHGAFL-HEGSFCRNWFNLLDLLVVSVSLVSFFLHSSAIS--------VVK 952

  Fly  2278 VFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEG 2342
            :.|:||.|||||.||||.|||.|||.:..::|.||||:::......:|..:|||||||.||.|..
Zfish   953 ILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTD 1017

  Fly  2343 ENIKGVRNA-DECR--------------RIPGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIM 2392
            |    .:|. ::|:              .:...:|.|..:|||::...:|:||.:|:.:||..::
Zfish  1018 E----AKNTPEQCKGTFVVYKDGDVSHPMVRERIWLNSDFNFDNVLMGMMALFTVSTFEGWPALL 1078

  Fly  2393 YTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKEEKIRRAA 2457
            |..:||.|.:..||.||.....::||.:|:::.||::|:|||.|:..|   ||:.|.|.|     
Zfish  1079 YKAIDANGENHGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITF---REQGEAEFK----- 1135

  Fly  2458 KRALQMEKKRRRMHEPPYYTNYSPTRMFV---------HNVVTSKYFDLAIAAVIGLNVVTMAME 2513
              ..:::|.:|:..|  |.....|.::::         .:::.|..|:..:..:|.||.||:|::
Zfish  1136 --NCELDKNQRQCVE--YALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMFVLILLNTVTLAVQ 1196

  Fly  2514 YYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELE 2578
            :|.........:.|.|..||.:|.:|..:||:||..:.|..|.||..|..||:.|:|.||:.|..
Zfish  1197 HYDQSKFFSQVMDILNMVFTGLFTVEMIIKLMALRLRHYFVDAWNSFDALIVVGSVVDIVVTEFS 1261

  Fly  2579 TNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAA 2643
            ::...    :...|...|:.|:.|::|||....|||.||.|.:::|..:..:.||..::|||:|.
Zfish  1262 SSEDS----SRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYAV 1322

  Fly  2644 LGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTL-RDNCDDAAD-- 2705
            :|::.||::...|...   :..:.:|..|..|.|.|||.|||:.|..||..:| ...||..:|  
Zfish  1323 IGMQTFGKIAMQDHTQ---INRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDAESDFE 1384

  Fly  2706 ------CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLM---------------KHLEESHK 2749
                  |..|      ||.::|:.|.::..|:::|:.|||:|               .||:| .|
Zfish  1385 PGEEFSCGSN------IAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDE-FK 1442

  Fly  2750 QMEDELDME----------VELERELVREQEFAQEQKLCQQLAEAQSKAA--------------- 2789
            ::..|.|.|          |.|.|.:.....|.   |||......:...|               
Zfish  1443 RIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFG---KLCPHRVACKRLVAMNMPLNADGTVTFNA 1504

  Fly  2790 ---APPRPLAKVKS--------------LPKNFIYSTPS-LDKKFPAVS---------------- 2820
               |..|...|:|:              :.|.:..:.|. ||:..|..:                
Zfish  1505 TLFALVRTALKIKTDGNPDQENEELRIIIKKIWKRTKPKVLDEVIPPPAEEEVTVGKFYATFLIQ 1569

  Fly  2821 ------------------GVNNPSLTSSAATNL-------------------------------- 2835
                              |..||:........|                                
Zfish  1570 DYFRKFRKRKEKVGLEEEGNGNPTALQLCQAGLRTLQELGPEMRLAMNEDLEEEEEGLDEEQEED 1634

  Fly  2836 ---------------------NQVATAGSGGAAPGAVPAGSGAGPRRQTVQYFQQPPQSMLGGL- 2878
                                 :.:||...|  ||..|| |.|.                :.||| 
Zfish  1635 DAHYKNENGYAHTEPLSRSRRSSLATTPIG--APVPVP-GDGI----------------LNGGLG 1680

  Fly  2879 ---SLAEMGGTLTPQALGARLGEPFGGGGGNKSG-------------PRRQSYWQI--------- 2918
               |||:     ||...||...|.|......:|.             |:|.||::.         
Zfish  1681 RRSSLAK-----TPNGNGALENENFRRRDSMRSSIHYQHKNGVIDQLPKRPSYYKYPRRDSRDRF 1740

  Fly  2919 -NPIRKR---GVLSKERSL-----DEQAIRRRNLEAKRTSCDSLPWGGDALDCRRG-----TIFE 2969
             :|:.:|   |....|:..     |.:::..|.                    |.|     |||:
Zfish  1741 SSPLSRREEGGEYPGEQRFYGKDEDSESVISRE--------------------RHGYPEDSTIFQ 1785

  Fly  2970 SLESDGGGVGGGGSGGGGGGLGGGVSYDLRSVRSADVG--HSEMDGDVSLSVVSALVPSVTTPLP 3032
                                 |....||..|:|....|  :....||...:....|:|:  ||..
Zfish  1786 ---------------------GHRDMYDGHSMRHPVYGNHYGNSYGDGRRTARRRLLPA--TPTG 1827

  Fly  3033 PPLSLPIVTPTSTPTPLQLPMPMPMPMAHPPPR-RPFGWSQSVDQGCLRSNLLLSVPRSMPPRSR 3096
            ...|..|.......:...||:|.......||.| |..|:| |.|.            |....||.
Zfish  1828 RKASFNIQCLRRQGSSDDLPIPGTYHQNSPPCRARSQGYS-SYDS------------RRSSARSS 1879

  Fly  3097 SGST-----------KQLFKQQALDEDADMDENSLLLPTAAGGGSG-----PGSVAVIAS 3140
            :|||           :.|:....|.|:..         .|..||.|     ||.|.|.||
Zfish  1880 TGSTASWANTGPRRGRLLYAPLILVEEEG---------AAGAGGVGIWDKKPGGVGVPAS 1930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921 89/322 (28%)
Ion_trans 1261..1495 CDD:278921 87/246 (35%)
Ion_trans 2192..2448 CDD:278921 97/273 (36%)
Ion_trans 2510..2728 CDD:278921 71/226 (31%)
cacna1fbXP_021333942.1 Ion_trans 114..407 CDD:306908 102/357 (29%)
Ion_trans 532..763 CDD:306908 91/260 (35%)
Ion_trans 856..1093 CDD:306908 88/250 (35%)
Ion_trans 1178..1431 CDD:306908 83/265 (31%)
GPHH 1432..1502 CDD:318993 15/73 (21%)
Ca_chan_IQ 1504..1575 CDD:312334 9/70 (13%)
CAC1F_C 1601..2067 CDD:318975 82/419 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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