DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1T and tpcn3

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_001170916.1 Gene:tpcn3 / 557460 ZFINID:ZDB-GENE-141215-16 Length:773 Species:Danio rerio


Alignment Length:776 Identity:157/776 - (20%)
Similarity:310/776 - (39%) Gaps:213/776 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2107 HRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKH-----FTTEREDYSLYIFPEDNRFRQ 2166
            |.|:||:        ....||....|.   :.:|:|.|.     :.::.: |:..|| .|...:.
Zfish    11 HTLTKDE--------GFTNGGNHVPSN---VTDQMTEKFDLATVYVSDAK-YNRNIF-FDTSPQA 62

  Fly  2167 ICTWFVNQKWF-DNVVLLFIALNCITLAMERPNIPP------SSTERLFLATANYVFTVVFTVEM 2224
            :..:.:...|| ..:|.:||.:|......|.|.:.|      |:.|.:.|:        .|||.:
Zfish    63 VKLYLLYNHWFMQTLVYVFIIINLALALFEDPAVVPLPIWATSTIETICLS--------AFTVRI 119

  Fly  2225 --FIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRV-----FRLL 2282
              :.||:.      .|.::....||....:||:|.||::          |:|.|:.     .|..
Zfish   120 IHYAKVIP------KDKFWKDPKNICIIIIVTLSFIDMV----------IYGALKATGHYGIRWS 168

  Fly  2283 RSLRPLRVINRAPG--LKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENI 2345
            |.||||.::|...|  |:...:::.::|..|..:..:.....::|.::.::||            
Zfish   169 RVLRPLLLVNVTEGRQLRRAFRSIRNALPQISYVFFLFMFSVLVFSLMALKLF------------ 221

  Fly  2346 KGVRNADECRRIPGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYN 2410
             |.|         |.:..|....|.|....:..|:||.:.....::|           .|..|.:
Zfish   222 -GKR---------GLLTINGSPYFTDYMDIVFDLYVLVTTANSPDVM-----------MPAYNSS 265

  Fly  2411 EWRLLYFIAFILLVGFFVLNMFVGVVVENFHR-CREEQEKEEKIRRAAK-RALQMEKKRRRMHEP 2473
            .:..::||.:|::..:..::.|:.||..|:.: .:||..:..|.:|... ||..:.::.|.....
Zfish   266 VYFTIFFILYIVINTYTFMSFFLAVVYNNYKKYLKEEVRQLVKAKRIKMCRAFSLLQENRGEGGE 330

  Fly  2474 PYYT--NYSPTRMFVHNVVTS-------------------KYFDLAIAAVIGLNVVTMAME---- 2513
            |..|  |::.....|...:::                   |:..:.:|.::.:.|:|:..:    
Zfish   331 PVVTQANWNHLVKLVKPKISTAHRELLWSVLDDQNKGHIGKFAFVQLADLLSIQVITVKSQAHPI 395

  Fly  2514 -------YYKMPSGLKYAL---KIFNYF---------------------------FTAVFILEAN 2541
                   |..:||.....:   ::|.|.                           |.|:::||..
Zfish   396 QICFPSLYNSLPSRFIRQMVHHRVFVYAYDLIILVNAVFIGLDEENPVVSNAEWGFLALYMLEIL 460

  Fly  2542 MKLVALGWKLYLKDR--WNQLDVGIVLLSIVGIVLEELETN-----THQIIPINPTIIRVMRVLR 2599
            :||.|...:.:....  ||..|..||:.::.|.::.....:     :.|::    .|:.::||||
Zfish   461 LKLYATEPRAFFARHQFWNWFDTIIVVSALFGTIINSALKHSGGYTSRQVL----DIVFILRVLR 521

  Fly  2600 IARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRLE-------CSD 2656
            :.||:..:|.   .||:::|:::..|.:...|.|..::::|||.:|:||| |:::       ..|
Zfish   522 LIRVVDSIKR---FRAIINTLIKIGPTILTFGQLILVVYYIFAMVGMELFKGKIQFFEPNSTSPD 583

  Fly  2657 EIPC-QGLGEHAHFA-------NFG---MAFLTLFRVATGDNWNGIMKDTLRDNCDDAADCVRNC 2710
            ...| ..|.:...||       ||.   .:|:.|..:...:.|:.:....              .
Zfish   584 REYCGNPLLKSTSFAKLNYCKNNFNDVISSFILLLELTVVNQWHVLTSGF--------------T 634

  Fly  2711 CVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMK-----------HLEESHKQMEDELDMEVE 2760
            .|:.|.|.:|||||.::...:::|:.||.:::           .|:.|.::..:||::.|:
Zfish   635 AVTHVSARLFFVIFHIVVVIIIINIFVAFILEAFLVEYTVDKSELQTSLEKKIEELELNVQ 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921
Ion_trans 1261..1495 CDD:278921
Ion_trans 2192..2448 CDD:278921 57/271 (21%)
Ion_trans 2510..2728 CDD:278921 59/284 (21%)
tpcn3NP_001170916.1 Ion_trans 73..295 CDD:395416 59/278 (21%)
Ion_trans 417..>571 CDD:395416 37/160 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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