DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-alpha1T and cacna1ba

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:XP_009299772.1 Gene:cacna1ba / 555941 ZFINID:ZDB-GENE-060531-44 Length:2378 Species:Danio rerio


Alignment Length:3259 Identity:657/3259 - (20%)
Similarity:1063/3259 - (32%) Gaps:1326/3259 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 PGFPEISIRALTQYTRPRNWCLMLITNP--------------------------------W--FE 304
            ||.|.:..:.:.|..|     .|.|.||                                |  ||
Zfish    34 PGGPRVYKQTMAQRAR-----TMAIYNPIPVKQNCLTVNRSLFIFSEDNIIRKYAKKITEWPPFE 93

  Fly   305 RVSILVILLNCITLGMYQ--PCVDDACVTNRCKILQIFDDIIFAFFALEMTIKMVAMGIC-GKNT 366
            .:.:..|:.|||.||:.|  |.:|...::.|   |...:......|..|..||::|:|.. .|.:
Zfish    94 YMILATIIANCIVLGLEQHLPALDKTPMSKR---LDDTEPYFIGIFCFEAGIKIIALGFAFHKGS 155

  Fly   367 YLADSWNRLDFFIVLAGLLEYVMHVENLNLTAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPML 431
            ||.:.||.:||.:||.|:|..|  ..:.:|..:|.:||||||:.::.|||:::::..::..:..|
Zfish   156 YLRNGWNVMDFVVVLTGILTIV--GPDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPL 218

  Fly   432 GNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSK 496
            ..:.||.||...:|.|||:..:.|...:.|  .||                              
Zfish   219 LQIGLLLFFAILMFAIIGLDFYMGKFHRTC--FRT------------------------------ 251

  Fly   497 DQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPF 561
                      |:|..: ..||        |..|:..:        :|.|.    |.|::....|.
Zfish   252 ----------DTGEQV-DEFP--------CGLESPAW--------TCENG----TECREYWIGPN 285

  Fly   562 QGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAH-SFWDWIYFVLLIVIGSFFMINLCLVVIA 625
            .|..:||||..|.:.:|..|::|||.||:|...||. :.|:|:||:.||:||||||:||.|.|::
Zfish   286 FGITNFDNILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLS 350

  Fly   626 TQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLY 690
            .:|:  |:||....|||                                        .||..|..
Zfish   351 GEFA--KERERVEKRQE----------------------------------------FLKLRRQQ 373

  Fly   691 KYQRQ---------QRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNS 746
            :.:|:         :.:|.:|...|........:..:..||                        
Zfish   374 QIERELTGYLEWICKAEEVMLAEEDKNAEDKDDVAWYKRKC------------------------ 414

  Fly   747 ASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSA 811
                              |..|..|                                        
Zfish   415 ------------------NNPGGFT---------------------------------------- 421

  Fly   812 HHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPD-GLPRSSSLKKSTAHHQLKPEGSAA 875
                                              :||..| |||.....|||             
Zfish   422 ----------------------------------RSLGADFGLPVLKRAKKS------------- 439

  Fly   876 EQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNA 940
                     ...:|::|:        |:.|                                   
Zfish   440 ---------KNDLINAEE--------GEDH----------------------------------- 452

  Fly   941 DPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEK 1005
                                                                             
Zfish   453 ----------------------------------------------------------------- 452

  Fly  1006 MTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYT 1070
                                    :.|.|                |||                 
Zfish   453 ------------------------FTDIS----------------SVA----------------- 460

  Fly  1071 SLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTID 1135
                                  |.|                          .|.|.::|....|:
Zfish   461 ----------------------PQG--------------------------SPFTRTSVKSSKIE 477

  Fly  1136 SHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQN 1200
            | .:..||||..                                                     
Zfish   478 S-LSYFRRKEKR----------------------------------------------------- 488

  Fly  1201 ALSPLDERPRQRSPTTRCLISVYRCMSRVCSWIRRYIRRLVEHKYFQQGILLAILINTLSMGIEY 1265
                                            .|.:|||:|:.:.|...:|..:.:|||.:.|.:
Zfish   489 --------------------------------FRFFIRRMVKAQSFYWTVLCIVGLNTLCVAIVH 521

  Fly  1266 HNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGN 1330
            ::||..||..:..:..||.|:|.:||.||:...||..|..:.||.||..:::.|..|:....:  
Zfish   522 YDQPEWLTYALYLAEFVFLGLFLIEMSLKMYGLGPRTYFHSSFNCFDFGVIVGSIFEVIWAAV-- 584

  Fly  1331 GTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYL 1395
             ..|...|:||||..|||||.|:.::..:||..:..:|.:|.::.....||.|||.:|::|||.|
Zfish   585 -KPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQL 648

  Fly  1396 FGGKFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGME 1460
            |||:| .|.||:                    ...:|:....|.:|||||||.||||.|:::|:|
Zfish   649 FGGQF-NFEDET--------------------PTTNFDTFPAAILTVFQILTGEDWNAVMYHGIE 692

  Fly  1461 KTS--H---WAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRE--LVKKLREETLA 1518
            ...  |   :.::||:.|..||||.|.|:.:||.|:..::.:...::.|::|  :.|||..:...
Zfish   693 SQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAISKKLALQKAK 757

  Fly  1519 E----------NYSDGMYDESRSEADS-STTNDSYYEVRNRWRSAE----------DVRK----- 1557
            |          |.|...:......|.| |::|.|.:..:.:.||.:          .:||     
Zfish   758 EVKEVSPMSAANISITAFIRPNPGALSCSSSNSSSHSPKEQQRSLKMMSVWEQRTTQIRKHMLAS 822

  Fly  1558 ------------LQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDR 1610
                        |..::.|..:.|:::.|..:::|..|..|            |..||...|.|.
Zfish   823 SEALYQEELNPRLMSNLPLRTDIKTHLDRPLVVEPRCDGPI------------SPHSGWDKPQDL 875

  Fly  1611 ERDRDRDRDR------------ERDRDRDRER-----DREAGGGGKEEGAQH-----AKPRGGLK 1653
            :.:.....:|            .|...|.|||     :.....|..:||..|     :|...|.:
Zfish   876 QGEGSTPEERVPPVFEPPQSHPPRKHHRHRERLSNETNENGDTGHAKEGRHHVHHSRSKEHDGTR 940

  Fly  1654 KTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLL 1718
                .||.:.:..|      :|:                                          
Zfish   941 ----CKEGKGDRSR------SRE------------------------------------------ 953

  Fly  1719 RPPNIFTGGQR-----SLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSM 1778
                   ||:|     |:|||:                             |||........|..
Zfish   954 -------GGRRHHHQSSVDEGV-----------------------------GGGEREHRHHHSHR 982

  Fly  1779 HSVIIDDISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMS--RNANT 1841
            |:                                           ....|.:.|.|.|  |:...
Zfish   983 HN-------------------------------------------REGNGVVSAGGKSERRSRQK 1004

  Fly  1842 GASTSGSSSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEE 1906
            ..|.||:...||.........|. ::|.|..:||               |:.||:.:.:....||
Zfish  1005 EGSRSGTREGERCSRGENGGNGG-RRRHRPRTSK---------------AQSTLEGEEQHVNGEE 1053

  Fly  1907 EEQQQ----LNNGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRA 1967
            |.:.|    ::.|||:..:  |.:....||....::     |::|    .|..:||.  .|.   
Zfish  1054 EGKSQSHRHMDMGGDSMAV--NPHQPSVGSRWCLEK-----PEDS----DNKRNIGQ--TGG--- 1102

  Fly  1968 SACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKW 2032
                .::.:...:..||                  .:|:.:.::::::....::           
Zfish  1103 ----MSTHIPVTVTSPP------------------GETTLIPMNSIDSETVPMT----------- 1134

  Fly  2033 NKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTT 2097
                                                  ||.|:.|.|...:.:|           
Zfish  1135 --------------------------------------EKNLEDLNQSSIRPIL----------- 1150

  Fly  2098 QQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDN 2162
                                  |.|                               |::||...|
Zfish  1151 ----------------------PFS-------------------------------SMFIFNPTN 1162

  Fly  2163 RFRQICTWFVNQKWFDNVVLLFIALNCITLAMERP---NIPPSSTERLFLATANYVFTVVFTVEM 2224
            ..|::|.:.|:.::|:..:|:.||::.|.||.|.|   |.|.::.    |...:||||.|||.||
Zfish  1163 PVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNV----LKYLDYVFTGVFTFEM 1223

  Fly  2225 FIKVVATGMFYGHDAYFTSGWNIMD-----GSLVTISIIDLL---MSLISESSPRIFGILRVFRL 2281
            .||:|..|:.....:||...|||:|     |:||..:....:   .|:...:..:....::..|:
Zfish  1224 VIKMVDLGLILHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGSHQSVNRGTKGKDISTIKSLRV 1288

  Fly  2282 LRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENIK 2346
            ||.||||:.|.|.|.||.|...:::||:.:.||:::...|..||.::.||||||.|:||..|: |
Zfish  1289 LRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDES-K 1352

  Fly  2347 GVRNADECRRI-----------PGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVG 2400
            |:..  :||.:           ....|...::::|::..|.::||.:|:.:||..::...:||..
Zfish  1353 GLEK--DCRGLFLDYDKDDVTAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATF 1415

  Fly  2401 VDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKEEKIRRAAKRALQMEK 2465
            .||.|...|.....::::.:.::..||.:|:||.:::..|      ||:.:|:....    .:||
Zfish  1416 EDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITF------QEQGDKVLSEC----SLEK 1470

  Fly  2466 KRR-----RMHEPPYYTNYSP--TRMFVHNV---VTSKYFDLAIAAVIGLNVVTMAMEYYKMPSG 2520
            ..|     .::..| .|.|.|  .:.|.:.:   |.|..|:.:|..:|.||.|.:.|:::..|..
Zfish  1471 NERACIDFAINAKP-LTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIALNTVVLMMKFHGAPDF 1534

  Fly  2521 LKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQII 2585
            .:..||..|..||.:|.||..:|::|.|...||||.||..|...||.||..|::.|:.|...|: 
Zfish  1535 YEAMLKYLNIVFTVLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTERQL- 1598

  Fly  2586 PINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 2650
                 ....:|:.|.||::|||:....||.||.|.:|:...:..:.||..:||||:|.:|:::||
Zfish  1599 -----NFSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFG 1658

  Fly  2651 RLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRD-NCDDAADCVRNCCVSS 2714
            .::.:|:   ..:..|.:|..|..|.:.|||.|||:.|:.||...|.: .||.::..:...| .|
Zfish  1659 NIDLNDD---TAINRHNNFRTFLQALMLLFRSATGEAWHDIMLSCLSERTCDPSSGTLGKEC-GS 1719

  Fly  2715 VIAPIFFVIFVLMAQFVLVNVVVAVLM---------------KHLEE------------------ 2746
            ..|..:||.|:.:..|:::|:.|||:|               .||:|                  
Zfish  1720 DFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKY 1784

  Fly  2747 ------------------------SHKQM--------ED-----------------ELDM----- 2757
                                    ::|::        :|                 |:.:     
Zfish  1785 LDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMV 1849

  Fly  2758 -----EVELEREL--------------------------------------VREQEFAQEQKLCQ 2779
                 :.||::||                                      .::....:.|...|
Zfish  1850 AQRLSDAELKKELSTVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQ 1914

  Fly  2780 QLAE-----AQSKAAA---PPRPLAKVKSLPKNFIYSTPSLDKKF-PAVSGVNNPSLT------- 2828
            ||.|     :|:|.:|   |..||..::..|.|.:.|......:. |:.:.:||...|       
Zfish  1915 QLKEQAGPGSQNKVSALLEPILPLTHMQDQPVNGVDSASECQAQTRPSSTTLNNGRTTLDNTIKG 1979

  Fly  2829 --SSAATNLNQVATAGSGGAAPGAVPAGSGAGPRRQTVQYFQQPPQS---MLGGLS--------- 2879
              |.|:....:|..:.....:.|.....|.|...:::|:..:....:   ..|||.         
Zfish  1980 SSSWASEKSKEVQKSKRRPMSRGQSEDASNANTAQESVEMRKMENSANTVTSGGLEGQGRAASMP 2044

  Fly  2880 --LAEMGGTLTPQALGARLGEPFGGGGGNKSGPRRQSYWQINPIRKRGVLSKERSLDE------- 2935
              .|||..:.:.|:.|..| ||.      ...|.|:|.....|.|...|...:..|::       
Zfish  2045 KLNAEMQRSHSRQSPGTLL-EPI------PDSPMRRSASTFAPQRPHEVNLNDYILEKPVQERHH 2102

  Fly  2936 ------QAIRRRNLEAKRTSCDSLPWGGDALDCRRGTIFESLESDGGGVGGGGSGGGGGGLGGGV 2994
                  :...||:.:.|:.|.|..|.|...   ..||..:|:|......|...........|...
Zfish  2103 HHHHHHRCHHRRDRDKKQRSLDRSPTGHHK---TTGTATDSVEERAHDRGRSHERKHHSSSGEKQ 2164

  Fly  2995 SY-------------DLRSVRSADVGHSEMD-------------GDVSLSVVSALVPS------V 3027
            .|             ...:|.|.....||..             |...|....|..||      .
Zfish  2165 RYYSCDRYASREHCSSKSAVASCATSPSETQEANLNKQGSGWAKGSPVLLTSGASTPSRGRRQLP 2229

  Fly  3028 TTPLPPPLSLPIVTPTSTPTPLQLPMPMPMPMAHPPPRRPFGWSQSVDQGCLRSNLLL---SVPR 3089
            .|||.|..|:...|..|:|..|.......:|   |.|.|       :.:|....|.||   |:..
Zfish  2230 QTPLTPRPSVAYRTANSSPVQLLATTTSLLP---PSPGR-------LSRGLSEHNALLLSGSISS 2284

  Fly  3090 SMPPRSRSGSTKQLFKQQALDEDADMDENSLLLPTAAGGGSGPGSVAVIASSSLDLPDQSGSSKQ 3154
            |..|.||                  ::....|.|.....|..|.:.||...:.   ..|.|.|.|
Zfish  2285 SPAPVSR------------------INSEPFLGPPDHPAGLQPEAFAVFQENP---SPQMGRSPQ 2328

  Fly  3155 I--LPDIAL 3161
            .  :|.:|:
Zfish  2329 TVGMPFVAI 2337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921 90/305 (30%)
Ion_trans 1261..1495 CDD:278921 84/238 (35%)
Ion_trans 2192..2448 CDD:278921 84/277 (30%)
Ion_trans 2510..2728 CDD:278921 74/218 (34%)
cacna1baXP_009299772.1 Ion_trans 132..361 CDD:278921 89/295 (30%)
Ion_trans 517..738 CDD:278921 84/244 (34%)
Ion_trans 1192..1416 CDD:278921 74/230 (32%)
Ion_trans 1524..1757 CDD:278921 80/242 (33%)
GPHH 1765..1828 CDD:293510 3/62 (5%)
Ca_chan_IQ 1830..1904 CDD:285917 5/73 (7%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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