Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031751845.1 | Gene: | scn8a / 549640 | XenbaseID: | XB-GENE-1011299 | Length: | 1987 | Species: | Xenopus tropicalis |
Alignment Length: | 2786 | Identity: | 556/2786 - (19%) |
---|---|---|---|
Similarity: | 957/2786 - (34%) | Gaps: | 1026/2786 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 267 GEPNLPYPGFPEISIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVT 331
Fly 332 NRCKILQIFDDIIFAF---FALEMTIKMVAMGICGKN-TYLADSWNRLDFFIVLAGLLEYVMHVE 392
Fly 393 NL-NLTAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGI 456
Fly 457 LRQRCSLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMH------LCGN 515
Fly 516 FPPYRIGSLV--CNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIF 578
Fly 579 LVISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQER 643
Fly 644 ARYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNL 708
Fly 709 TFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAA 773
Fly 774 GGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQH 838
Fly 839 SSSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGK 903
Fly 904 SHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAA 968
Fly 969 AATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADC 1033
Fly 1034 SELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQ 1098
Fly 1099 TTPGAEGATVM-----------------VASTAGDTGQTLQPSTVSAVVGG------TIDSHAAN 1140
Fly 1141 HRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPL 1205
Fly 1206 DERPRQRSPTTRCLISVYRCMSRVCSWIR--RYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQ 1268
Fly 1269 PPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTG 1333
Fly 1334 GGG----SGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMY 1394
Fly 1395 LFGGKFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGM 1459
Fly 1460 EKTSH-WAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSD 1523
Fly 1524 GMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINE 1588
Fly 1589 LPASSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLK 1653
Fly 1654 KTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLL 1718
Fly 1719 RPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGM---------GGGVPSTAGS 1774
Fly 1775 SSSMHSVIIDDISKSSSSTAAATPIYVPTISSTADAQSQSHSLN-----DVSVGSSPGGEIPATG 1834
Fly 1835 MSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQA 1899
Fly 1900 RRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGS 1964
Fly 1965 RRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDL 2029
Fly 2030 DKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFS 2094
Fly 2095 STTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFP 2159
Fly 2160 EDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEM 2224
Fly 2225 FIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLR 2289
Fly 2290 VINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENIKG------V 2348
Fly 2349 RNADECRRIPGN-----VWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVN 2408
Fly 2409 YNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREE--------QEKEEKIRRAAKRALQMEK 2465
Fly 2466 KRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNY 2530
Fly 2531 FFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVM 2595
Fly 2596 RVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPC 2660
Fly 2661 QGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLR--DNCD----DAADCVRNCCVSSVIAPI 2719
Fly 2720 FFVIFVLMAQFVLVNVVVAVLMKHLEESHKQMEDELDMEVELERELVREQEFAQEQKLCQQLAEA 2784
Fly 2785 QSKAAAPPRPLAKVKSLPKNFIYSTPSLDKKFPAVSGVNNPSLTSSAATNLNQVATAGSGGAAPG 2849
Fly 2850 AVPAGSGAGPRRQTVQYFQQPPQSMLGGLSLAEMGGTLTPQALGARLGEPFGGGGGNKSGPRRQS 2914
Fly 2915 YWQINPIRKRGVLSKERSLDEQAIRR----RNLEAKRTSCDSLPWGGDALDCRRGT 2966 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 88/316 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 75/238 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 95/274 (35%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 72/223 (32%) | ||
scn8a | XP_031751845.1 | Ion_trans | 131..421 | CDD:395416 | 94/347 (27%) |
Na_trans_cytopl | 503..709 | CDD:403218 | 50/344 (15%) | ||
Ion_trans | 759..972 | CDD:395416 | 72/239 (30%) | ||
Na_trans_assoc | 998..1199 | CDD:399489 | 65/659 (10%) | ||
Ion_trans | 1204..1480 | CDD:395416 | 99/282 (35%) | ||
Na_channel_gate | 1472..1524 | CDD:240441 | 9/57 (16%) | ||
Ion_trans | 1529..1783 | CDD:395416 | 83/263 (32%) | ||
GPHH | 1795..1842 | CDD:407139 | 9/52 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |