DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-alpha1T and para

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster


Alignment Length:2904 Identity:601/2904 - (20%)
Similarity:1007/2904 - (34%) Gaps:1069/2904 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 RNWCLMLITNPWFERVSILVILLNCITLGM-YQPCVDDACVTNRCKILQIFDDIIF-AFFALEMT 353
            |...:.::.:|.|....|..||:|||.:.| ..|.|:..             ::|| ..:..|..
  Fly   143 RRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST-------------EVIFTGIYTFESA 194

  Fly   354 IKMVAMG--ICGKNTYLADSWNRLDFFIVLAGLLEYV-MHVENLNLTAIRTIRVLRPLRAINRIP 415
            :|::|.|  :| ..|||.|:||.|||.::   .|.|| |.::..||.|:||.||||.|:.:..:|
  Fly   195 VKVMARGFILC-PFTYLRDAWNWLDFVVI---ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVP 255

  Fly   416 SMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPL------T 474
            .::.:|..:::::..|.:|::|..|...:|.::|:|::.|:|.|:|.      ..:||      .
  Fly   256 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI------KKFPLDGSWGNL 314

  Fly   475 VPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMH--LCGNFPPYRIGSLVCNEEAKLFDFNE 537
            ..|.:....| ||.:.|.|             |.|:.  ||||..    |:..|:::        
  Fly   315 TDENWDYHNR-NSSNWYSE-------------DEGISFPLCGNIS----GAGQCDDD-------- 353

  Fly   538 PTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDW 602
                        |...:..|.||..|..|||:.|.|:::.|.:::.:.|.|:...|..|...|..
  Fly   354 ------------YVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHM 406

  Fly   603 IYFVLLIVIGSFFMINLCLVVIATQFSETKKR--EMERMRQERARYTSTSTLASSTNNSEPATCY 665
            ::|:::|.:|||:::||.|.::|..:.|.:|:  |.|...:|..|....:..|.:....|.|...
  Fly   407 LFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQ 471

  Fly   666 AEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKP 730
            |:..                                   ||......:.:.....|.|.|     
  Fly   472 AQAA-----------------------------------ADAAAAEEAALHPEMAKSPTY----- 496

  Fly   731 SSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVAL 795
            |.|..::..                                   ||...|::||....|..:|. 
  Fly   497 SCISYELFV-----------------------------------GGEKGNDDNNKEKMSIRSVE- 525

  Fly   796 VNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGLPRSS-SL 859
               :...:.||.              |:|.......|..:.:..|:.:.....:|..:.|.| |.
  Fly   526 ---VESESVSVI--------------QRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSS 573

  Fly   860 KKSTAHHQLKPEG-SAAEQKTILLKFPQQMIDSEQLI----------------------LQLGNL 901
            .|.|..:.....| ..:::|.::|...|   |::|.:                      :..|||
  Fly   574 HKYTIRNGRGRFGIPGSDRKPLVLSTYQ---DAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL 635

  Fly   902 GKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAA 966
            |..|       |..||...|.|...:..:|                           .|.|....
  Fly   636 GSRH-------SSYTSHQSRISYTSHGDLL---------------------------GGMAVMGV 666

  Fly   967 AAAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYA 1031
            :.....|...|.|.:|  .|.||..||||   .:.:..|:    |...:::.|            
  Fly   667 STMTKESKLRNRNTRN--QSVGATNGGTT---CLDTNHKL----DHRDYEIGL------------ 710

  Fly  1032 DCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQ 1096
            :|::                                           .|..::.|..|...|. |
  Fly   711 ECTD-------------------------------------------EAGKIKHHDNPFIEPV-Q 731

  Fly  1097 NQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTS 1161
            .||.  .:...||                   |:...|:..|..|.|......|.::....:...
  Fly   732 TQTV--VDMKDVM-------------------VLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDE 775

  Fly  1162 HSRNYRSRQGQGNSRMREPRAPTGNYME------DYACCYDLYQNALSPLDERPRQRSPTTRCLI 1220
            ....::.:.                 :|      |..|.:|                        
  Fly   776 DGPTFKDKA-----------------LEVILKGIDVFCVWD------------------------ 799

  Fly  1221 SVYRCMSRVCSWI----RRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNV 1281
                     |.|:    :.::..:|...:.:..|.|.|::||:.|.:::|:...|:..::::.|.
  Fly   800 ---------CCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNY 855

  Fly  1282 VFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGG--GGSGLSVLRT 1344
            .|:..||:|..:|::|..|..|...|:|:||.|||.||.:|:          |  |..||||||:
  Fly   856 FFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLEL----------GLEGVQGLSVLRS 910

  Fly  1345 FRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGL 1409
            |||||:.||.:..|.|...:.:|.|||..:.....:|.:.||||:::||.|||..:....|    
  Fly   911 FRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKD---- 971

  Fly  1410 ERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAALY----- 1469
                       |.|..:..|.:|.:.:.:.:.||::|..| |       :|  |.|..:|     
  Fly   972 -----------RFPDGDLPRWNFTDFMHSFMIVFRVLCGE-W-------IE--SMWDCMYVGDVS 1015

  Fly  1470 ----FVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESR 1530
                |:|.:..||.|:.||.:|:|:..|.|.                              ..|.
  Fly  1016 CIPFFLATVVIGNLVVLNLFLALLLSNFGSS------------------------------SLSA 1050

  Fly  1531 SEADSSTTNDSYYEVRNR------WRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINEL 1589
            ..||:.|  :...|..||      |..    |.:.|..:||....:|             ||::.
  Fly  1051 PTADNDT--NKIAEAFNRIGRFKSWVK----RNIADCFKLIRNKLTN-------------QISDQ 1096

  Fly  1590 PASSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKK 1654
            |:                |:|                                            
  Fly  1097 PS----------------GER-------------------------------------------- 1101

  Fly  1655 TYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLR 1719
            |..|....||...:.:...|                            :.||.|           
  Fly  1102 TNQISWIWSEGKGVCRCISA----------------------------EHGDNE----------- 1127

  Fly  1720 PPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIID 1784
               :..|....|.:|:..              ..|...:||.|.:|.|:..|      :|     
  Fly  1128 ---LELGHDEILADGLIK--------------KGIKEQTQLEVAIGDGMEFT------IH----- 1164

  Fly  1785 DISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSS 1849
                                                                             
  Fly  1165 ----------------------------------------------------------------- 1164

  Fly  1850 SSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNN 1914
                         |..|      ::|.:::..|..||||                          
  Fly  1165 -------------GDMK------NNKPKKSKYLNNATDD-------------------------- 1184

  Fly  1915 GGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQN 1979
                                                  :|.||.|  .||.:             
  Fly  1185 --------------------------------------DTASINS--YGSHK------------- 1196

  Fly  1980 LNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDN 2044
             |:|                  |...||          |..:.|                     
  Fly  1197 -NRP------------------FKDESH----------KGSAET--------------------- 1211

  Fly  2045 MLQQYMEARDKRKNSISHYNLKKRL-EEKELQQ-------LQQLHQQQLLQQRQDSFSSTTQQQQ 2101
                 ||..:||..|.....|.:.| ||.|.::       :...|.:.:|.:             
  Fly  1212 -----MEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDE------------- 1258

  Fly  2102 QQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQ 2166
                             .|....|  ...|.|..:|...                   :|:.|.|
  Fly  1259 -----------------YPADCCP--DSYYKKFPILAGD-------------------DDSPFWQ 1285

  Fly  2167 ICTW---------FVNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTV 2222
              .|         .:..|:|:..|:..|.::.:.||:|..::|.....:..|...:.:|||:|.:
  Fly  1286 --GWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFL 1348

  Fly  2223 EMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRP 2287
            ||.||.:|.|.    ..|||:.|..:|..:|.:|:|:.:.||:.....:.|   :..|.||:|||
  Fly  1349 EMLIKWLALGF----KVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAF---KTMRTLRALRP 1406

  Fly  2288 LRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGEN-------I 2345
            ||.::|..|:::||..|:.::..|.|::|:|..|::||.|:|||||.|.::.||..|       |
  Fly  1407 LRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEI 1471

  Fly  2346 KGVRNADECRRIPGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYN 2410
            ...|||.|....   .|.|...|||.:|.|.:.||.:::..||:.||...:|:..||:|||...|
  Fly  1472 IPNRNACESENY---TWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETN 1533

  Fly  2411 EWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREE---------QEKEEKIRRAAKRALQMEKK 2466
            .:..|||:.||:...||.||:|:||:::||:..:::         .|.::|...|.|: :..:|.
  Fly  1534 IYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKK-MGSKKP 1597

  Fly  2467 RRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYF 2531
            .:.:..|    .:.| :..|..:||.|.||:.|...||||:.||.::.|.........|...|..
  Fly  1598 LKAIPRP----RWRP-QAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAI 1657

  Fly  2532 FTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMR 2596
            |..:|..|..:|:.||.:. |..:.||..||.:|:|||:|:||.::.....    ::||::||:|
  Fly  1658 FVVIFSSECLLKIFALRYH-YFIEPWNLFDVVVVILSILGLVLSDIIEKYF----VSPTLLRVVR 1717

  Fly  2597 VLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQ 2661
            |.::.|||:|:|.|.|||.||..:..:||.:.|:.||.||:.||||..|:..|..::     ...
  Fly  1718 VAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVK-----EKS 1777

  Fly  2662 GLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRDNCDDAADCVRNC---CVSSVIAPIFFVI 2723
            |:.:..:|..||.:.:.||:::|...|:|::...:.:...|..|..:..   |.|:.:...|.:.
  Fly  1778 GINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLS 1842

  Fly  2724 FVLMAQFVLVNVVVAVLMKHLEESHKQM-----EDELDMEVELERELVRE-QEFAQEQKLCQQLA 2782
            :::::..:::|:.:||::::..::.:.:     :|:.||..|:.::...| .::.:..:|.:.| 
  Fly  1843 YLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFL- 1906

  Fly  2783 EAQSKAAAPPRPLAKVK-------SLP---KNFIYSTPSLD---KKFPAVSGVNNPSLTSSAATN 2834
                ....||..:.|..       .:|   .:.:|....||   |.|.|..|  ||         
  Fly  1907 ----DVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKG--NP--------- 1956

  Fly  2835 LNQVATAGSGGAAP---GAVPAGSGAGPRRQ-----TVQYFQQPPQSMLGGLSLAEMGGTLTPQA 2891
            :.:....|...|.|   |..|..|....:|:     .:|:..:..::.      .|.||:..|..
  Fly  1957 IEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKAR------GEGGGSFEPDT 2015

  Fly  2892 LGARLGEPFGGGGGNKSGPRRQSYWQINPIRKRGVLSKERSLDEQAIRRRNLEAKRTSCDSLPWG 2956
                   ..|.||...:|         :|       :.:.:.|..|                |.|
  Fly  2016 -------DHGDGGDPDAG---------DP-------APDEATDGDA----------------PAG 2041

  Fly  2957 GDALDCRRGTIFESLESDGGGVGGGG--------------------SGGGGGGLGGGVSYDLRSV 3001
            ||.  ...||...:.::|...|...|                    :|..|.|..|..:..|   
  Fly  2042 GDG--SVNGTAEGAADADESNVNSPGEDAAAAAAAAAAAAAAGTTTAGSPGAGSAGRQTAVL--- 2101

  Fly  3002 RSADVGHSEMDGDVSLS----VVSALVPSVTT--------PLPP 3033
                   .|.||.|:.:    |:.:..||:|:        |.||
  Fly  2102 -------VESDGFVTKNGHKVVIHSRSPSITSRTADVXARPRPP 2138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921 86/317 (27%)
Ion_trans 1261..1495 CDD:278921 77/244 (32%)
Ion_trans 2192..2448 CDD:278921 95/271 (35%)
Ion_trans 2510..2728 CDD:278921 66/220 (30%)
paraNP_001259619.1 Ion_trans 165..436 CDD:278921 91/331 (27%)
Na_trans_cytopl 515..648 CDD:288761 29/160 (18%)
Ion_trans 835..1028 CDD:278921 69/227 (30%)
Na_trans_assoc 1054..1296 CDD:284034 77/658 (12%)
Ion_trans 1318..1571 CDD:278921 95/262 (36%)
Na_channel_gate 1561..1613 CDD:240441 9/57 (16%)
Ion_trans 1636..1871 CDD:278921 69/244 (28%)
GPHH 1880..1930 CDD:293510 9/54 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439104
Domainoid 1 1.000 73 1.000 Domainoid score I3264
eggNOG 1 0.900 - - E1_KOG2301
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10037
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.890

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