Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017455544.1 | Gene: | Cacna1d / 29716 | RGDID: | 70973 | Length: | 2207 | Species: | Rattus norvegicus |
Alignment Length: | 2743 | Identity: | 524/2743 - (19%) |
---|---|---|---|
Similarity: | 816/2743 - (29%) | Gaps: | 1374/2743 - (50%) |
- Green bases have known domain annotations that are detailed below.
Fly 184 RHERRDRRDEQQAARRRTGRR-------------HSGASSLSDAAAATAAGRSRSRGGGRTGGAV 235
Fly 236 SSSTGSSCNGSCSSDDGDSSHTSSSSSSSSSGEPNLPYPGFPEISIRALTQYTRPRNWCLMLITN 300
Fly 301 P----------W--FERVSILVILLNCITLGMYQPC-VDDACVTNRCKILQIFDDIIFAF---FA 349
Fly 350 LEMTIKMVAMG-ICGKNTYLADSWNRLDFFIVLAGLLEYVMHVENL-----------------NL 396
Fly 397 TAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC 461
Fly 462 SLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVC 526
Fly 527 NEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMY 591
Fly 592 YVQDAHSF-WDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASS 655
Fly 656 TNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHP 720
Fly 721 KCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNN 785
Fly 786 NAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAP 850
Fly 851 DGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPP 915
Fly 916 TSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNH 980
Fly 981 QNGGASGGAGTGGTTEKSNIFSTEKMTQAGD-----GSIWQVNLPQTIGTIANPYADC--SELGI 1038
Fly 1039 HDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGA 1103
Fly 1104 EGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRS 1168
Fly 1169 RQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCS-- 1231
Fly 1232 --WIRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLK 1294
Fly 1295 VVAEGPFRYIANGFNVFDGIIV-------ILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILK 1352
Fly 1353 LVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTCPE 1417
Fly 1418 IISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGM------EKTSHWAALYFVALMTF 1476
Fly 1477 GNYVLFNLLVAILVEGFSSERN----ERREREQRELVKKLREETLAENYSDGMYDESR-SEADSS 1536
Fly 1537 TTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGT 1601
Fly 1602 SGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAP 1666
Fly 1667 RLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSL 1731
Fly 1732 DEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAA 1796
Fly 1797 TPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQ 1861
Fly 1862 QGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSN 1926
Fly 1927 AVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSG 1991
Fly 1992 QRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKR 2056
Fly 2057 KNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPH 2121
Fly 2122 SMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIA 2186
Fly 2187 LNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGS 2251
Fly 2252 LVTISIID--LLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNI 2314
Fly 2315 VLICCTFFIIFGILGVQLFKGTFYYCEGENIKGVRNADECRRI-----PGNV---------WTNR 2365
Fly 2366 KYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLN 2430
Fly 2431 MFVGVVVENFHRCREEQEKEEK-------IRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHN 2488
Fly 2489 VVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYL 2553
Fly 2554 KDRWNQLDVGIVLLSIVGIVLEELE------TNTHQ------------IIPINPT---------- 2590
Fly 2591 -----------IIRVMRVLRIARVLKLLKMANGIRALLDTVM---QALPQVGNLGLLFFLLFFIF 2641
Fly 2642 AALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRDN-CDDAAD 2705
Fly 2706 --------CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLM---------------KHLEES 2747
Fly 2748 HKQMEDELDMEVE 2760 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 89/325 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 86/246 (35%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 97/271 (36%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 81/268 (30%) | ||
Cacna1d | XP_017455544.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |