Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062138.1 | Gene: | Scn11a / 29701 | RGDID: | 3630 | Length: | 1765 | Species: | Rattus norvegicus |
Alignment Length: | 2572 | Identity: | 500/2572 - (19%) |
---|---|---|---|
Similarity: | 845/2572 - (32%) | Gaps: | 1074/2572 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 291 RNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDD-----IIFAFFAL 350
Fly 351 EMTIKMVAMG-ICGKNTYLADSWNRLDFFIVLAGLLEYVMHVENLNLTAIRTIRVLRPLRAINRI 414
Fly 415 PSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVY 479
Fly 480 RVRVRVN------SLSQYYEFSKD-QDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNE 537
Fly 538 PTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDW 602
Fly 603 IYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAE 667
Fly 668 IVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSS 732
Fly 733 IQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVN 797
Fly 798 GINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGLPRSSSLKKS 862
Fly 863 TAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFN 927
Fly 928 EYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTG 992
Fly 993 GTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAA 1057
Fly 1058 LPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQ 1122
Fly 1123 PSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNY 1187
Fly 1188 MEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCSWIRRYIRRLVEHKYFQQGILL 1252
Fly 1253 AILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVI 1317
Fly 1318 LSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLV 1382
Fly 1383 LFIFIFSILGMYLFGGKFCK--FLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQI 1445
Fly 1446 LTQEDWNVVLFNGMEKT--SHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQREL 1508
Fly 1509 VKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMH 1573
Fly 1574 RQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGG 1638
Fly 1639 KEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQ 1703
Fly 1704 WGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGV 1768
Fly 1769 PSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPAT 1833
Fly 1834 GMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQ 1898
Fly 1899 ARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVG 1963
Fly 1964 SRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSK--TSHLNLHNLEANRKSLSYTNSK 2026
Fly 2027 MDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNS-ISHYNLKKRLEEKELQQLQQLHQQQLLQQRQ 2090
Fly 2091 DSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSL 2155
Fly 2156 YIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPP-SSTERLFLATANYVFTVV 2219
Fly 2220 FTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRS 2284
Fly 2285 LRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYC-EGENIK-- 2346
Fly 2347 ----GVRNADECRRIPGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIV 2407
Fly 2408 NYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREE--------QEKEEKIRRAAKRALQME 2464
Fly 2465 KKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFN 2529
Fly 2530 YFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRV 2594
Fly 2595 MRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIP 2659
Fly 2660 CQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTL--RDNCDDAADCVRNCCVSSVIAPIFFV 2722
Fly 2723 IFVLMAQFVLVNVVVAVLMKHLEESHKQMEDEL---DMEVELERELVREQEFAQEQKLCQQLAEA 2784
Fly 2785 QSKAAAPPRPLAKVKSLPKNFIYSTPSLDKKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 83/316 (26%) |
Ion_trans | 1261..1495 | CDD:278921 | 70/237 (30%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 96/271 (35%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 68/219 (31%) | ||
Scn11a | NP_062138.1 | I. /evidence=ECO:0000305 | 115..403 | 88/506 (17%) | |
Ion_trans | 160..404 | CDD:278921 | 82/452 (18%) | ||
II. /evidence=ECO:0000305 | 554..820 | 87/369 (24%) | |||
Ion_trans | 589..807 | CDD:278921 | 73/276 (26%) | ||
Na_trans_assoc | 812..1029 | CDD:284034 | 62/633 (10%) | ||
III. /evidence=ECO:0000305 | 1022..1319 | 108/412 (26%) | |||
Ion_trans | 1051..1297 | CDD:278921 | 96/261 (37%) | ||
Na_channel_gate | 1289..1341 | CDD:240441 | 11/57 (19%) | ||
IV. /evidence=ECO:0000305 | 1328..1619 | 94/311 (30%) | |||
Ion_trans | 1363..1595 | CDD:278921 | 72/243 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |