Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936827.1 | Gene: | Scn5a / 25665 | RGDID: | 3637 | Length: | 2020 | Species: | Rattus norvegicus |
Alignment Length: | 2607 | Identity: | 553/2607 - (21%) |
---|---|---|---|
Similarity: | 942/2607 - (36%) | Gaps: | 934/2607 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 SIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDII 344
Fly 345 FAFFALEMTIKMVAMGIC-GKNTYLADSWNRLDF-FIVLAGLLEYVMHVENLNLTAIRTIRVLRP 407
Fly 408 LRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC----------- 461
Fly 462 SLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVC 526
Fly 527 NEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMY 591
Fly 592 YVQDAHSFWD--WIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLAS 654
Fly 655 STNNSEPATCYAEIVKYIAHLWRRFKR--RMLKKYRLYKYQRQQRKEGL-LPNADNLTFSPSRIK 716
Fly 717 CHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNN-NN 780
Fly 781 NNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTE 845
Fly 846 QSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSG 910
Fly 911 FLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGS 975
Fly 976 GNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHD 1040
Fly 1041 AMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEG 1105
Fly 1106 ATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQ 1170
Fly 1171 GQGNSRMREPRAPTGNYMEDYAC------CYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRV 1229
Fly 1230 CSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEML 1292
Fly 1293 LKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFM 1357
Fly 1358 PNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKF---LDESGLERECTCPEII 1419
Fly 1420 SRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMTFGNYVLFN 1483
Fly 1484 LLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNR 1548
Fly 1549 WRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRERD 1613
Fly 1614 RDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTY----SIKERRSEAPRLSKIRLA 1674
Fly 1675 RDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSID 1739
Fly 1740 LIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTI 1804
Fly 1805 SSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRL 1869
Fly 1870 RRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSS 1934
Fly 1935 GTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIE 1999
Fly 2000 LAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYN 2064
Fly 2065 LKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGE 2129
Fly 2130 RYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAM 2194
Fly 2195 ERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIID 2259
Fly 2260 LLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFII 2324
Fly 2325 FGILGVQLFKGTFYYC----EGE---NIKGVRNADECR--RIPGNV-WTNRKYNFDDLGKALMSL 2379
Fly 2380 FVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCR 2444
Fly 2445 EE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAA 2501
Fly 2502 VIGLNVVTMAMEY-YKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIV 2565
Fly 2566 LLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNL 2630
Fly 2631 GLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDT 2695
Fly 2696 LRDN---CD---DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EESHKQ 2750
Fly 2751 M-EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTPSLDK 2814
Fly 2815 KFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 89/318 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 77/237 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 93/273 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 72/224 (32%) | ||
Scn5a | XP_038936827.1 | Ion_trans | 131..424 | CDD:395416 | 95/365 (26%) |
Na_trans_cytopl | 484..668 | CDD:403218 | 56/441 (13%) | ||
Ion_trans | 717..930 | CDD:395416 | 74/238 (31%) | ||
Na_trans_assoc | 956..1203 | CDD:399489 | 73/590 (12%) | ||
Ion_trans | 1207..1482 | CDD:395416 | 97/281 (35%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 10/57 (18%) | ||
Ion_trans | 1531..1785 | CDD:395416 | 84/264 (32%) | ||
GPHH | 1797..1844 | CDD:407139 | 11/58 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |