DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1T and Tpcn1

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_665852.1 Gene:Tpcn1 / 252972 MGIID:2182472 Length:817 Species:Mus musculus


Alignment Length:811 Identity:163/811 - (20%)
Similarity:316/811 - (38%) Gaps:209/811 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  2069 LEEKE---LQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGG-- 2128
            |:|.|   |.....|.|:||..:...|.|....|....:..          |..|.|...|..  
Mouse    15 LDEAESAPLPPSNSLGQEQLPSKNGGSHSIHNSQVPSLVSG----------ADSPPSSPTGHNWE 69

  Fly  2129 ERYSKLKMLIE--QLTPKHFTTEREDYSL--YIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNC 2189
            ..|.:..:.::  |...|.||..::..:|  |:|..::       :|...:....::||.::| |
Mouse    70 MNYQEAAIYLQEGQNNDKFFTHPKDARALAAYLFVHNH-------FFYMMELLTALLLLLLSL-C 126

  Fly  2190 ITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVT 2254
                 |.|.:|.........||......:|...|:.:|:    .:.|...:......::..|::.
Mouse   127 -----ESPAVPVLKLHTYVHATLELFALMVVVFELCMKL----RWLGFHTFVRHKRTMVKTSVLV 182

  Fly  2255 ISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVIN--RAPGLKLVVQTLLSSLRPIGNIVLI 2317
            :..|:.::.|:.::|.        .|:.|:||.:.:::  ...|::..::.:..||.|..:|:|:
Mouse   183 VQFIEAIVVLVRQTSH--------VRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILLL 239

  Fly  2318 CCTFFIIFGILGVQLFKGTFYYCEGENIKGVRNADECRRIPGNVWTNRKYNFDDLGKALMSLFVL 2382
            ...|.|||.|||..||...                     |.:.:      |..|..::::||||
Mouse   240 LLFFMIIFAILGFYLFSTN---------------------PSDPY------FSTLENSIVNLFVL 277

  Fly  2383 SSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQ 2447
            .:...:.::|           .|..:.|.|..::||.::.:..:|::|:.:.||.:.|:...:.:
Mouse   278 LTTANFPDVM-----------MPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKHK 331

  Fly  2448 EKE------------------------------------EKIRRAAKR----------------- 2459
            .|.                                    .|.|.:|:.                 
Mouse   332 FKSLLLHKRTAIQHAYGLLASQRRPAGISYRQFEGLMRFYKPRMSARERFLTFKALNQSNTPLLS 396

  Fly  2460 -----------ALQMEKKRRRMHEPPYYTNYSPTRMF-----VHNVVTSKYFDLAIAAVIGLNVV 2508
                       |||.:.||.|.|    :.:..|...|     ::.:|.||.|...:..|:.:|.|
Mouse   397 LKDFYDIYEVAALQWKAKRNRQH----WFDELPRTAFLIFKGINILVNSKAFQYFMYLVVAVNGV 457

  Fly  2509 TMAMEYYKMPSGLKYALKI-FNYF-FTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVG 2571
            .:.:|.:.:..|...:..: ::|. |..::.:|..||:..||...||...||..|..:...:.:|
Mouse   458 WILVETFMLKGGNFTSKHVPWSYLVFLTIYGVELFMKVAGLGPVEYLSSGWNLFDFSVTAFAFLG 522

  Fly  2572 IVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFL 2636
            ::          .:.:|......:.|||..::|:|.|:....|.:|||:.:.||::.:|||....
Mouse   523 LL----------ALTLNMEPFYFIVVLRPLQLLRLFKLKKRYRNVLDTMFELLPRMASLGLTLLT 577

  Fly  2637 LFFIFAALGVELF-GRLE---CSDEIPC-----------------QGLGEHAHFANFGMAFLTLF 2680
            .::.||.:|:|.| |||.   |:.....                 :|.....:|.|...:|:|||
Mouse   578 FYYSFAIVGMEFFNGRLTPNCCNTSTVADAYRFINHTVGNKTKVEEGYYYLNNFDNILNSFVTLF 642

  Fly  2681 RVATGDNWNGIMKDTLRDNCDDAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMK--- 2742
            .:...:||..||:.....              :|..:.::|:.|.::. .|::.::||.:::   
Mouse   643 ELTVVNNWYIIMEGVTSQ--------------TSHWSRLYFMTFYIVT-MVVMTIIVAFILEAFV 692

  Fly  2743 -HLEESHKQMEDELDMEVELERELVREQEFA 2772
             .:..|.|..:.|:|..:.:|:|:.:|:..|
Mouse   693 FRMNYSRKSQDSEVDSGIVIEKEMSKEELMA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921
Ion_trans 1261..1495 CDD:278921
Ion_trans 2192..2448 CDD:278921 50/257 (19%)
Ion_trans 2510..2728 CDD:278921 54/240 (23%)
Tpcn1NP_665852.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..65 11/54 (20%)
Ion_trans 137..331 CDD:366146 47/243 (19%)
Ion_trans 441..691 CDD:366146 63/274 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 785..817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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