Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277603.1 | Gene: | Scn9a / 20274 | MGIID: | 107636 | Length: | 1984 | Species: | Mus musculus |
Alignment Length: | 2605 | Identity: | 550/2605 - (21%) |
---|---|---|---|
Similarity: | 946/2605 - (36%) | Gaps: | 949/2605 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAFF 348
Fly 349 ALEMTIKMVAMGIC-GKNTYLADSWNRLDF-FIVLAGLLEYVMHVENL-NLTAIRTIRVLRPLRA 410
Fly 411 INRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC---SLMRTEGMVYP 472
Fly 473 LTVPEVYRVRVRVNSLSQYY---EFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFD 534
Fly 535 FNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSF 599
Fly 600 WDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATC 664
Fly 665 YAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRK 729
Fly 730 PSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVA 794
Fly 795 LVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSD-NTEQSLAPDGLPRSSS 858
Fly 859 LKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPS 923
Fly 924 VMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGG 988
Fly 989 AGTGGTTEKSNIFSTEKMTQAGD-----GSIWQVNLPQTIGTIANPYADCSELG----------- 1037
Fly 1038 IHDAMTCQELLAFSVAFSA-ALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTP 1101
Fly 1102 GAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNY 1166
Fly 1167 RSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRV-- 1229
Fly 1230 --CS--WI--RRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFA 1288
Fly 1289 VEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKL 1353
Fly 1354 VRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTCPEI 1418
Fly 1419 ISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAAL-YFVALMTFGNYVLF 1482
Fly 1483 NLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRN 1547
Fly 1548 RWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRER 1612
Fly 1613 DRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDP 1677
Fly 1678 PIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIP 1742
Fly 1743 PSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISST 1807
Fly 1808 ADAQSQSHSLN-DVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRR 1871
Fly 1872 GSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGT 1936
Fly 1937 KETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELA 2001
Fly 2002 FSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLK 2066
Fly 2067 KRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERY 2131
Fly 2132 SKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMER 2196
Fly 2197 PNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLL 2261
Fly 2262 MSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFG 2326
Fly 2327 ILGVQLFKGTFYYC----EGE--NIKGVRNADEC---RRIPGNV-WTNRKYNFDDLGKALMSLFV 2381
Fly 2382 LSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREE 2446
Fly 2447 --------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAAVI 2503
Fly 2504 GLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLS 2568
Fly 2569 IVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLL 2633
Fly 2634 FFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRD 2698
Fly 2699 ---NCD----DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EESHKQM- 2751
Fly 2752 EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTPSLDKKF 2816
Fly 2817 PAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 96/312 (31%) |
Ion_trans | 1261..1495 | CDD:278921 | 76/234 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 99/273 (36%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 69/224 (31%) | ||
Scn9a | NP_001277603.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 26..55 | ||
I. /evidence=ECO:0000305 | 112..410 | 105/354 (30%) | |||
Ion_trans | 147..410 | CDD:278921 | 97/319 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 458..540 | 17/152 (11%) | |||
Na_trans_cytopl | 487..606 | CDD:288761 | 28/206 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 574..609 | 6/39 (15%) | |||
II. /evidence=ECO:0000305 | 725..988 | 92/333 (28%) | |||
Ion_trans | 760..955 | CDD:278921 | 68/217 (31%) | ||
Na_trans_assoc | 981..1185 | CDD:284034 | 64/655 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1015..1039 | 7/65 (11%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1089..1145 | 20/89 (22%) | |||
III. /evidence=ECO:0000305 | 1178..1486 | 112/455 (25%) | |||
Ion_trans | 1224..1464 | CDD:278921 | 94/246 (38%) | ||
Na_channel_gate | 1456..1508 | CDD:240441 | 9/57 (16%) | ||
IV. /evidence=ECO:0000305 | 1495..1793 | 92/314 (29%) | |||
Ion_trans | 1530..1768 | CDD:278921 | 75/247 (30%) | ||
GPHH | 1780..1835 | CDD:293510 | 14/64 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1933..1984 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |