Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017172001.1 | Gene: | Scn8a / 20273 | MGIID: | 103169 | Length: | 1988 | Species: | Mus musculus |
Alignment Length: | 2670 | Identity: | 535/2670 - (20%) |
---|---|---|---|
Similarity: | 945/2670 - (35%) | Gaps: | 955/2670 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 244 NGSCSSDDGDSSHTSSSSSSSSSGEPNLPYPGFPEISIRA---------LTQYT----------- 288
Fly 289 -----------RP----RNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQ 338
Fly 339 IFDDIIFAF---FALEMTIKMVAMGICGKN-TYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTA 398
Fly 399 IRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSL 463
Fly 464 MRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNE 528
Fly 529 EAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYV 593
Fly 594 QDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNN 658
Fly 659 SEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCP 723
Fly 724 KYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAA 788
Fly 789 SCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGL 853
Fly 854 PRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSA 918
Fly 919 SRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNG 983
Fly 984 GASGGAGTGGTTEKSNIFSTEKMTQAGD-GSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQEL 1047
Fly 1048 LAFSVAFSAALPTGQSTLESFYTSLARCDPHTA--EALRAHHKPRSVPTGQNQTTPGAEGATVMV 1110
Fly 1111 ASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNS 1175
Fly 1176 RMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCSW-------- 1232
Fly 1233 IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLKVVA 1297
Fly 1298 EGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRR 1362
Fly 1363 QLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTCPEIISRHPQCEC 1427
Fly 1428 DRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMTFGNYVLFNLLVAILVE 1491
Fly 1492 GFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNRWRSAEDVR 1556
Fly 1557 KLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRERDRDRDRDRE 1621
Fly 1622 RDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDPPIITTTAAT 1686
Fly 1687 PQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKP 1751
Fly 1752 LNILNASQLGVGM---------GGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISST 1807
Fly 1808 ADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRG 1872
Fly 1873 SSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTK 1937
Fly 1938 ETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAF 2002
Fly 2003 SKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKK 2067
Fly 2068 RLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHS-MVPGGGERY 2131
Fly 2132 SKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMER 2196
Fly 2197 PNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLL 2261
Fly 2262 MSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFG 2326
Fly 2327 ILGVQLFKGTFYYCEGE------NIKGVRNADECRRI-PGN----VWTNRKYNFDDLGKALMSLF 2380
Fly 2381 VLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCRE 2445
Fly 2446 E--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDLAIAAV 2502
Fly 2503 IGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLL 2567
Fly 2568 SIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGL 2632
Fly 2633 LFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLR 2697
Fly 2698 DNCDDAAD------CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EESHKQM- 2751
Fly 2752 EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYSTPSLDKKF 2816
Fly 2817 PAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 84/308 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 77/234 (33%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 93/274 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 68/223 (30%) | ||
Scn8a | XP_017172001.1 | Ion_trans | 131..421 | CDD:366146 | 90/339 (27%) |
Na_trans_cytopl | 504..710 | CDD:371806 | 47/350 (13%) | ||
Ion_trans | 760..973 | CDD:366146 | 74/235 (31%) | ||
Na_trans_assoc | 999..1200 | CDD:368948 | 65/655 (10%) | ||
Ion_trans | 1205..1481 | CDD:366146 | 97/282 (34%) | ||
Na_channel_gate | 1473..1525 | CDD:240441 | 10/57 (18%) | ||
Ion_trans | 1530..1784 | CDD:366146 | 80/263 (30%) | ||
GPHH | 1796..1843 | CDD:374878 | 10/58 (17%) | ||
IQ | 1902..1923 | CDD:197470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |