Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006512056.1 | Gene: | Scn5a / 20271 | MGIID: | 98251 | Length: | 2085 | Species: | Mus musculus |
Alignment Length: | 2615 | Identity: | 551/2615 - (21%) |
---|---|---|---|
Similarity: | 933/2615 - (35%) | Gaps: | 949/2615 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 SIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDII 344
Fly 345 FAFFALEMTIKMVAMGIC-GKNTYLADSWNRLDF-FIVLAGLLEYVMHVENLNLTAIRTIRVLRP 407
Fly 408 LRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRC----------- 461
Fly 462 SLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVC 526
Fly 527 NEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMY 591
Fly 592 YVQDAHSFWD--WIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLAS 654
Fly 655 STNNSEPATCYAEIVKYIAHLWRRFKR--RMLKKYRLYKYQRQQRKEGL-LPNADNLTFSPSRIK 716
Fly 717 CHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNN-NN 780
Fly 781 NNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTE 845
Fly 846 QSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSG 910
Fly 911 FLSP-PTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSG 974
Fly 975 SGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADC----SE 1035
Fly 1036 LGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTT 1100
Fly 1101 PGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRN 1165
Fly 1166 YRSRQGQGNSRMREPRAPTGNYMEDYAC------CYDLYQNALSPLDERPRQRSPTTRCLISVYR 1224
Fly 1225 CMSRVCSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIF 1287
Fly 1288 AVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILK 1352
Fly 1353 LVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKF---LDESGLERECT 1414
Fly 1415 CPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMTFGN 1478
Fly 1479 YVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYY 1543
Fly 1544 EVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPG 1608
Fly 1609 DRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTY----SIKERRSEAPRLS 1669
Fly 1670 KIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEG 1734
Fly 1735 IPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPI 1799
Fly 1800 YVPTISSTADAQSQSHSLNDVSVGSSPGGEIPA---TGMSRNANTGASTSGSSSSERLPLAPPPQ 1861
Fly 1862 QGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSN 1926
Fly 1927 AVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSG 1991
Fly 1992 QRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKR 2056
Fly 2057 KNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPH 2121
Fly 2122 SMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIA 2186
Fly 2187 LNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGS 2251
Fly 2252 LVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVL 2316
Fly 2317 ICCTFFIIFGILGVQLFKGTFYYC----EGE---NIKGVRNADECR--RIPGNV-WTNRKYNFDD 2371
Fly 2372 LGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVV 2436
Fly 2437 VENFHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSK 2493
Fly 2494 YFDLAIAAVIGLNVVTMAMEY-YKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRW 2557
Fly 2558 NQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQ 2622
Fly 2623 ALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDN 2687
Fly 2688 WNGIMKDTLRDN---CD---DAADCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL-- 2744
Fly 2745 --EESHKQM-EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFI 2806
Fly 2807 YSTPSLDKKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 89/318 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 77/237 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 93/273 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 72/224 (32%) | ||
Scn5a | XP_006512056.1 | Ion_trans | 195..488 | CDD:366146 | 95/365 (26%) |
Na_trans_cytopl | 550..732 | CDD:371806 | 52/444 (12%) | ||
Ion_trans | 781..994 | CDD:366146 | 74/238 (31%) | ||
Na_trans_assoc | 1020..1268 | CDD:368948 | 71/593 (12%) | ||
Ion_trans | 1272..1547 | CDD:366146 | 97/281 (35%) | ||
Na_channel_gate | 1539..1591 | CDD:240441 | 10/57 (18%) | ||
Ion_trans | 1596..1850 | CDD:366146 | 84/264 (32%) | ||
GPHH | 1862..1909 | CDD:374878 | 11/58 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |