Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001342095.1 | Gene: | Scn3a / 20269 | MGIID: | 98249 | Length: | 1996 | Species: | Mus musculus |
Alignment Length: | 2612 | Identity: | 546/2612 - (20%) |
---|---|---|---|
Similarity: | 940/2612 - (35%) | Gaps: | 951/2612 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAFF 348
Fly 349 ALEMTIKMVAMGICGKN-TYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRVLRPLRAI 411
Fly 412 NRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVP 476
Fly 477 EVYRVRVRVNSLSQYYEFSKD---------------QDYICSTPNDSGMH---------LCGNFP 517
Fly 518 PYRIGSLVCNEEAKLFDFNE-PTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVI 581
Fly 582 SLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARY 646
Fly 647 TSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFS 711
Fly 712 PSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGG 776
Fly 777 NNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSS 841
Fly 842 DNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHP 906
Fly 907 CTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAAT 971
Fly 972 GSGSGNNNHQN-GGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSE 1035
Fly 1036 LGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVP----TGQ 1096
Fly 1097 NQTTPGAEGATVMV---ASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNN 1158
Fly 1159 TTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRC----- 1218
Fly 1219 -LISVYRCMSRVCSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSN 1280
Fly 1281 VVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTF 1345
Fly 1346 RLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLE 1410
Fly 1411 RECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAAL-YFVALM 1474
Fly 1475 TFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTN 1539
Fly 1540 DSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGA 1604
Fly 1605 SAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLS 1669
Fly 1670 KIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEG 1734
Fly 1735 IPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPI 1799
Fly 1800 YVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGS 1864
Fly 1865 FKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVV 1929
Fly 1930 SGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRR 1994
Fly 1995 MSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNS 2059
Fly 2060 ISHYNLKKRLEEKELQQLQQLHQQQLLQQ---RQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPH 2121
Fly 2122 SMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIA 2186
Fly 2187 LNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGS 2251
Fly 2252 LVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVL 2316
Fly 2317 ICCTFFIIFGILGVQLFKGTFYYCEGE------NIKGVRNADECRRIPGNV-WTNRKYNFDDLGK 2374
Fly 2375 ALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVEN 2439
Fly 2440 FHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFD 2496
Fly 2497 LAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLD 2561
Fly 2562 VGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQ 2626
Fly 2627 VGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGI 2691
Fly 2692 MKDTLRD---NCDDAA----DCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----E 2745
Fly 2746 ESHKQM-EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKSLPKNFIYST 2809
Fly 2810 PSLDKKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 92/330 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 75/234 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 92/270 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 72/224 (32%) | ||
Scn3a | NP_001342095.1 | Ion_trans | 127..434 | CDD:306908 | 98/361 (27%) |
Na_trans_cytopl | 510..697 | CDD:314757 | 50/325 (15%) | ||
Ion_trans | 759..972 | CDD:306908 | 72/235 (31%) | ||
Na_trans_assoc | 998..1201 | CDD:310839 | 66/629 (10%) | ||
Ion_trans | 1206..1478 | CDD:306908 | 96/278 (35%) | ||
Na_channel_gate | 1470..1522 | CDD:240441 | 10/57 (18%) | ||
Ion_trans | 1526..1782 | CDD:306908 | 86/265 (32%) | ||
GPHH | 1786..1849 | CDD:318993 | 17/72 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |