DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1T and F17C8.6

DIOPT Version :9

Sequence 1:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_497974.1 Gene:F17C8.6 / 175626 WormBaseID:WBGene00008911 Length:279 Species:Caenorhabditis elegans


Alignment Length:143 Identity:34/143 - (23%)
Similarity:55/143 - (38%) Gaps:33/143 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  3076 QGCLRSNLLLSVPRSMPPRSRSGST------KQLFKQQALDEDADMDENSLLLPTAAGGGSGPGS 3134
            :.||: |:......::...|..|||      :::..:..:..:|..:|:||      .|..|.|.
 Worm   131 ENCLK-NIKAKQNNTLGKMSSIGSTFAFPQSQEVLTKGVVLTEASPEEDSL------QGDKGSGK 188

  Fly  3135 VAVIASSSLDLPDQSGSSKQILPDIALGVSKSDSSDILRIISERR---RMDQR----EQREPEQD 3192
            ...          |.|:|   :.:|.....|.........|||||   |..|.    |..|.|:|
 Worm   189 KKA----------QRGNS---ITEIVAEAQKKSVKRATDKISERRGTLRQMQMGTYDELEEVEED 240

  Fly  3193 QDNEAEDRDSDYK 3205
            :|.:.|.|.|.::
 Worm   241 EDTDGEIRRSSFE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921
Ion_trans 1261..1495 CDD:278921
Ion_trans 2192..2448 CDD:278921
Ion_trans 2510..2728 CDD:278921
F17C8.6NP_497974.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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